RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 RBAKDNA6NC62 111 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 K7EQG2 157 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 DYNLRB2Q8TF09 96 aa11.36□□□□□ -0.59
VRK3-218ENST00000600031 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 D6R8Y8 96 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 ID1P41134 155 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 TMEM61Q8N0U2 210 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
VRK3-218ENST00000600031 ATRQ13535 2644 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 H0Y8G0 127 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 CCL25O15444 150 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 ZNF688P0C7X2 276 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
VRK3-218ENST00000600031 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
VRK3-218ENST00000600031 KRTAP24-1Q3LI83 254 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 CITED1Q99966 193 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 SIGLEC8Q9NYZ4 499 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 SORL1Q92673 2214 aa11.34□□□□□ -0.59
VRK3-218ENST00000600031 F6UB75 175 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 NUDT3O95989 172 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
VRK3-218ENST00000600031 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 PRIMA1Q86XR5 153 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
VRK3-218ENST00000600031 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 COX8AP10176 69 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
VRK3-218ENST00000600031 MRPL51Q4U2R6 128 aaKnown RBP11.32□□□□□ -0.6
VRK3-218ENST00000600031 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
VRK3-218ENST00000600031 LGALS9BQ3B8N2 356 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
VRK3-218ENST00000600031 A0A096LNJ9 63 aa11.31□□□□□ -0.6
VRK3-218ENST00000600031 PF4P02776 101 aa11.31□□□□□ -0.6
VRK3-218ENST00000600031 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
VRK3-218ENST00000600031 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
VRK3-218ENST00000600031 Q6ZVH6 145 aa11.31□□□□□ -0.6
VRK3-218ENST00000600031 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
VRK3-218ENST00000600031 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 TP73-AS1Q9UF72 201 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 FBN1P35555 2871 aaKnown RBP11.3□□□□□ -0.6
VRK3-218ENST00000600031 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 SAP30O75446 220 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 NCR2O95944 276 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 HBDP02042 147 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 CKS2P33552 79 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
VRK3-218ENST00000600031 TWIST1Q15672 202 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
VRK3-218ENST00000600031 TRAV2A0A0B4J234 112 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 TAX1BP3O14907 124 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 PPBPP02775 128 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 VAMP3Q15836 100 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
VRK3-218ENST00000600031 ZNF256Q9Y2P7 627 aaPredicted RBP11.29□□□□□ -0.6
VRK3-218ENST00000600031 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
VRK3-218ENST00000600031 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
VRK3-218ENST00000600031 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
VRK3-218ENST00000600031 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
VRK3-218ENST00000600031 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
VRK3-218ENST00000600031 K7EP13 123 aa11.27□□□□□ -0.6
VRK3-218ENST00000600031 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.6
VRK3-218ENST00000600031 NPYP01303 97 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 ORM1P02763 201 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 DEFB131AP59861 70 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 C2orf91Q6ZV80 131 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 AGRNO00468 2067 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 VWFP04275 2813 aa11.27□□□□□ -0.61
VRK3-218ENST00000600031 A0A0J9YX75 114 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 IGLV1-51P01701 117 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 SEC11AP67812 179 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 PRR9Q5T870 116 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
VRK3-218ENST00000600031 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
VRK3-218ENST00000600031 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
VRK3-218ENST00000600031 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
VRK3-218ENST00000600031 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
VRK3-218ENST00000600031 J3KRW8 73 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 FGF6P10767 208 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 CACNG7P62955 275 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 Q6ZQT7 251 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms