RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 FBLL1A6NHQ2 334 aaKnown RBP8.08□□□□□ -1.12
HOMER3-211ENST00000599808 SULT1A1P50225 295 aa8.08□□□□□ -1.12
HOMER3-211ENST00000599808 BAALCQ8WXS3 180 aa8.08□□□□□ -1.12
HOMER3-211ENST00000599808 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
HOMER3-211ENST00000599808 WFDC1Q9HC57 220 aa8.08□□□□□ -1.12
HOMER3-211ENST00000599808 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
HOMER3-211ENST00000599808 LRP2P98164 4655 aa8.07□□□□□ -1.12
HOMER3-211ENST00000599808 BORCS7-ASMTA0A0B4J1R7 106 aa8.07□□□□□ -1.12
HOMER3-211ENST00000599808 CSN1S1P47710 185 aa8.07□□□□□ -1.12
HOMER3-211ENST00000599808 EIF5AL1Q6IS14 154 aaKnown RBP8.07□□□□□ -1.12
HOMER3-211ENST00000599808 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
HOMER3-211ENST00000599808 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
HOMER3-211ENST00000599808 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 TRBV6-4A0A1B0GX49 114 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 RBFOX3A6NFN3 312 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 TYMSP04818 313 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 RANP62826 216 aaKnown RBP8.06□□□□□ -1.12
HOMER3-211ENST00000599808 HBG1P69891 147 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 HBG2P69892 147 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 NHLH2Q02577 135 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 RHOHQ15669 191 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 FAM74A1Q5RGS3 127 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 DAZ4Q86SG3 579 aaKnown RBP8.06□□□□□ -1.12
HOMER3-211ENST00000599808 STX12Q86Y82 276 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 PRADC1Q9BSG0 188 aa8.06□□□□□ -1.12
HOMER3-211ENST00000599808 DAZ3Q9NR90 486 aaKnown RBP8.06□□□□□ -1.12
HOMER3-211ENST00000599808 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 DIRC3C9JPN6 131 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 RS1O15537 224 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 IGLV2-8P01709 118 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 SEC11BP0C7V7 166 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 HNRNPA3P51991 378 aaKnown RBP8.05□□□□□ -1.12
HOMER3-211ENST00000599808 ATP6V1FQ16864 119 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 CFAP126Q5VTH2 177 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 COMMD7Q86VX2 200 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 TMED6Q8WW62 240 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 FAM210AQ96ND0 272 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 SMIM3Q9BZL3 60 aa8.05□□□□□ -1.12
HOMER3-211ENST00000599808 SULT1A2P50226 295 aa8.04□□□□□ -1.12
HOMER3-211ENST00000599808 ACOT6Q3I5F7 207 aaPredicted RBP8.04□□□□□ -1.12
HOMER3-211ENST00000599808 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
HOMER3-211ENST00000599808 ATP5SQ99766 215 aa8.04□□□□□ -1.12
HOMER3-211ENST00000599808 TRAV21A0A0B4J279 112 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 OR7C2O60412 319 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 TOR2AQ5JU69 321 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 Q8N976 141 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 DAZAP1Q96EP5 407 aaKnown RBP8.03□□□□□ -1.12
HOMER3-211ENST00000599808 DNAJC30Q96LL9 226 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 SDF2L1Q9HCN8 221 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 COX11Q9Y6N1 276 aa8.03□□□□□ -1.12
HOMER3-211ENST00000599808 GGTLC3B5MD39 225 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 F6UZH7 168 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 CIDEAO60543 219 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 MT1HL1P0DM35 61 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 RAB5CP51148 216 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
HOMER3-211ENST00000599808 UBE2L3P68036 154 aaKnown RBP8.02□□□□□ -1.13
HOMER3-211ENST00000599808 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 KCNS1Q96KK3 526 aa8.02□□□□□ -1.13
HOMER3-211ENST00000599808 LINC00694P0DN24 101 aa8.01□□□□□ -1.13
HOMER3-211ENST00000599808 MGST1P10620 155 aaKnown RBP8.01□□□□□ -1.13
HOMER3-211ENST00000599808 ATP6V0CP27449 155 aa8.01□□□□□ -1.13
HOMER3-211ENST00000599808 BLOC1S1P78537 153 aa8.01□□□□□ -1.13
HOMER3-211ENST00000599808 LYPD6BQ8NI32 183 aa8.01□□□□□ -1.13
HOMER3-211ENST00000599808 RPH3ALQ9UNE2 315 aa8.01□□□□□ -1.13
HOMER3-211ENST00000599808 IGKV2D-24A0A075B6R9 120 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 TRAV8-1A0A0A6YYK1 113 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 RAB19A4D1S5 217 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 GAGE12JA6NER3 117 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 IGLV2-11P01706 119 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 GAGE1Q13065 139 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 GAGE4Q13068 117 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 GAGE5Q13069 117 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 GAGE13Q4V321 117 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 HSD17B11Q8NBQ5 300 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 RMI2Q96E14 147 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 PSMG3Q9BT73 122 aaPredicted RBP8□□□□□ -1.13
HOMER3-211ENST00000599808 SH3BGRL3Q9H299 93 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 TREM1Q9NP99 234 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
HOMER3-211ENST00000599808 PGPA6NDG6 321 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 PGPEP1LA6NFU8 196 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 UMAD1C9J7I0 102 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 ZNF506Q5JVG8 444 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 GOLT1AQ6ZVE7 132 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 OTORQ9NRC9 128 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 Q9UF83 564 aa7.99□□□□□ -1.13
HOMER3-211ENST00000599808 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
HOMER3-211ENST00000599808 OR2G3Q8NGZ4 309 aa7.98□□□□□ -1.13
HOMER3-211ENST00000599808 CMTM2Q8TAZ6 248 aa7.98□□□□□ -1.13
HOMER3-211ENST00000599808 WDR61Q9GZS3 305 aaKnown RBP7.98□□□□□ -1.13
HOMER3-211ENST00000599808 A0A087WWC5 75 aa7.97□□□□□ -1.13
HOMER3-211ENST00000599808 EIF3GO75821 320 aaKnown RBP eCLIP7.97□□□□□ -1.13
HOMER3-211ENST00000599808 ZNF80P51504 273 aaPredicted RBP7.97□□□□□ -1.13
HOMER3-211ENST00000599808 KHDC3LQ587J8 217 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms