RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
LIG1-218ENST00000599322 SIVA1O15304 175 aa9.78□□□□□ -0.84
LIG1-218ENST00000599322 BTF3P20290 206 aaKnown RBP9.78□□□□□ -0.84
LIG1-218ENST00000599322 PTH2Q96A98 100 aa9.78□□□□□ -0.84
LIG1-218ENST00000599322 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
LIG1-218ENST00000599322 PKD1P98161 4303 aa9.78□□□□□ -0.84
LIG1-218ENST00000599322 A8MWV9 139 aa9.77□□□□□ -0.85
LIG1-218ENST00000599322 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
LIG1-218ENST00000599322 MANBALQ9NQG1 85 aa9.77□□□□□ -0.85
LIG1-218ENST00000599322 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.85
LIG1-218ENST00000599322 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 K7EQD1 137 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 M0R036 132 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 RS1O15537 224 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 NXPH4O95158 308 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 IFNA1P01562 189 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 C1QBP02746 253 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 AKAP14Q86UN6 197 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 SLC51BQ86UW2 128 aa9.76□□□□□ -0.85
LIG1-218ENST00000599322 RYR1P21817 5038 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 SH2D1AO60880 128 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 LTAP01374 205 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 MGST1P10620 155 aaKnown RBP9.75□□□□□ -0.85
LIG1-218ENST00000599322 RHOHQ15669 191 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 Q6ZNX1 250 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 BAGE2Q86Y30 109 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 GNG13Q9P2W3 67 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
LIG1-218ENST00000599322 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
LIG1-218ENST00000599322 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
LIG1-218ENST00000599322 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
LIG1-218ENST00000599322 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
LIG1-218ENST00000599322 GATA1P15976 413 aaPredicted RBP9.74□□□□□ -0.85
LIG1-218ENST00000599322 EVI2AP22794 236 aa9.74□□□□□ -0.85
LIG1-218ENST00000599322 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
LIG1-218ENST00000599322 IGHV3-73A0A0B4J1V6 119 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 TRAV1-1A0A0B4J248 108 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 H3BVH4 76 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 K7EP13 123 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 SULT1A2P50226 295 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 ZNF674Q2M3X9 581 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 ZFP2Q6ZN57 461 aa9.73□□□□□ -0.85
LIG1-218ENST00000599322 hCG_2014768A0A024R1R8 64 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 GRIFINA4D1Z8 144 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 RHODO00212 210 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
LIG1-218ENST00000599322 EREGO14944 169 aa9.71□□□□□ -0.86
LIG1-218ENST00000599322 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
LIG1-218ENST00000599322 CRIP1P50238 77 aa9.71□□□□□ -0.86
LIG1-218ENST00000599322 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
LIG1-218ENST00000599322 DNLZQ5SXM8 178 aa9.71□□□□□ -0.86
LIG1-218ENST00000599322 ZFP82Q8N141 532 aa9.71□□□□□ -0.86
LIG1-218ENST00000599322 DAZAP1Q96EP5 407 aaKnown RBP9.71□□□□□ -0.86
LIG1-218ENST00000599322 PDE6DO43924 150 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 TIRAPP58753 221 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 C10orf126Q8N4M7 172 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 PARLQ9H300 379 aa9.7□□□□□ -0.86
LIG1-218ENST00000599322 M0R381 172 aa9.69□□□□□ -0.86
LIG1-218ENST00000599322 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
LIG1-218ENST00000599322 TNP2Q05952 138 aa9.69□□□□□ -0.86
LIG1-218ENST00000599322 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
LIG1-218ENST00000599322 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
LIG1-218ENST00000599322 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 CCL20P78556 96 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
LIG1-218ENST00000599322 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
LIG1-218ENST00000599322 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 CXCL1P09341 107 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 GNG4P50150 75 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 LINC00315P59091 139 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 BLOC1S1P78537 153 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.67□□□□□ -0.86
LIG1-218ENST00000599322 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
LIG1-218ENST00000599322 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 CRYGDP07320 174 aa9.66□□□□□ -0.86
LIG1-218ENST00000599322 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms