RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SH2D1AO60880 128 aa9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 MGST1P10620 155 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 FAM231DQ6ZW35 169 aa9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 TMEM256Q8N2U0 113 aa9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 ISOC2Q96AB3 205 aa9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
SHKBP1-218ENST00000598907 H7BYZ3 331 aa9.8□□□□□ -0.84
SHKBP1-218ENST00000598907 PNRC1Q12796 327 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-218ENST00000598907 TDRG1Q3Y452 100 aa9.8□□□□□ -0.84
SHKBP1-218ENST00000598907 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
SHKBP1-218ENST00000598907 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 ADIRFQ15847 76 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 LINC01559Q495D7 138 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 NUDT10Q8NFP7 164 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 NEU1Q99519 415 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
SHKBP1-218ENST00000598907 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 KRTAP10-2P60368 255 aa9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 RNF212Q495C1 297 aa9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 LINC01587Q99440 93 aa9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
SHKBP1-218ENST00000598907 HTN3P15516 51 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 ANXA2RQ3ZCQ2 193 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 DNLZQ5SXM8 178 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 IBA57Q5T440 356 aaKnown RBP9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 FRZBQ92765 325 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 SFRP2Q96HF1 295 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
SHKBP1-218ENST00000598907 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 P01737 135 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 PRM2P04554 102 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 CXCL1P09341 107 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 ERVFC1-1P60608 527 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 MUC21Q5SSG8 566 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 TMEM208Q9BTX3 173 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
SHKBP1-218ENST00000598907 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 NBDYA0A0U1RRE5 68 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 ZNF705GA8MUZ8 300 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 B4DEV8 164 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 GNRH2O43555 120 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 ORM1P02763 201 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 TYMSP04818 313 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 AZU1P20160 251 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 CT83Q5H943 113 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 OR10G8Q8NGN5 311 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 V9GYV3 84 aa9.75□□□□□ -0.85
SHKBP1-218ENST00000598907 M0R036 132 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 APOC3P02656 99 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 EMP1P54849 157 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 CLRN3Q8NCR9 226 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 OR2D3Q8NGH3 330 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 RNASE8Q8TDE3 154 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 MDFICQ9P1T7 246 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 NAGKQ9UJ70 344 aa9.74□□□□□ -0.85
SHKBP1-218ENST00000598907 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 CBY3A6NI87 242 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 RPS20P60866 119 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 RRN3P1Q2M238 152 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 SVBPQ8N300 66 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
SHKBP1-218ENST00000598907 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 FOXA3P55318 350 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 C16orf74Q96GX8 76 aa9.72□□□□□ -0.85
SHKBP1-218ENST00000598907 A0A087WWC5 75 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 C7orf77A4D0Y5 90 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 FAM231BA6NCW3 169 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 A8MWL6 223 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 SNAPINO95295 136 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 HTN1P15515 57 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 RHEBQ15382 184 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 TMEM88Q6PEY1 159 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 FAM210BQ96KR6 192 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 C9orf85Q96MD7 179 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 SSBP4Q9BWG4 385 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 CTDSP1Q9GZU7 261 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
SHKBP1-218ENST00000598907 XKRY2A2RUG3 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 360.9 ms