RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 NDUFS6O75380 124 aaKnown RBP7.2□□□□□ -1.26
LIG1-213ENST00000596672 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 RAB5AP20339 215 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 TXNDC17Q9BRA2 123 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 Q9H3A6 140 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 Q9H8V8 135 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 ARL2-SNX15V9GYD0 113 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 IGHV1OR15-1A0A075B7D0 117 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 IGHV3-53P01767 116 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 GPX1P07203 203 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 ZNF138P52744 262 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 KRTAP10-2P60368 255 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 PNRC1Q12796 327 aaPredicted RBP7.19□□□□□ -1.26
LIG1-213ENST00000596672 FHL2Q14192 279 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 MUC21Q5SSG8 566 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 SMIM7Q9BQ49 75 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 DERL1Q9BUN8 251 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 PARLQ9H300 379 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 TNFRSF18Q9Y5U5 241 aa7.19□□□□□ -1.26
LIG1-213ENST00000596672 H3BNG1 76 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 AKR1C3P42330 323 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 CCL18P55774 89 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 GNG5P63218 68 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 CTAG1AP78358 180 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 TMEM241Q24JQ0 296 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 Q6ZRN7 208 aaPredicted RBP7.18□□□□□ -1.26
LIG1-213ENST00000596672 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 UPK3BQ9BT76 320 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 OTORQ9NRC9 128 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 C11orf21Q9P2W6 132 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 EPDR1Q9UM22 224 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 RPH3ALQ9UNE2 315 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 MRPS16Q9Y3D3 137 aaKnown RBP7.18□□□□□ -1.26
LIG1-213ENST00000596672 HERC1Q15751 4861 aa7.18□□□□□ -1.26
LIG1-213ENST00000596672 TRAV8-1A0A0A6YYK1 113 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 PCP4L1A6NKN8 68 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 PEX7O00628 323 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 GNRH2O43555 120 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
LIG1-213ENST00000596672 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
LIG1-213ENST00000596672 IBA57Q5T440 356 aaKnown RBP7.17□□□□□ -1.26
LIG1-213ENST00000596672 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 LINC00479Q96M42 142 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 SDF2L1Q9HCN8 221 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 NAT8Q9UHE5 227 aa7.17□□□□□ -1.26
LIG1-213ENST00000596672 TRGV2A0A075B6R0 118 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
LIG1-213ENST00000596672 CRYBA4P53673 196 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 ADIRFQ15847 76 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 Q6AWC8 147 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 CMTM2Q8TAZ6 248 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 ZNF479Q96JC4 524 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 SGK494Q96LW2 274 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 C8orf49Q96NF6 230 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 CTDSP1Q9GZU7 261 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 TMEM242Q9NWH2 141 aa7.16□□□□□ -1.26
LIG1-213ENST00000596672 TRBV7-9A0A0J9YWB2 115 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 PGPEP1LA6NFU8 196 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 S100PP25815 95 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 RPL23P62829 140 aaKnown RBP7.15□□□□□ -1.26
LIG1-213ENST00000596672 FABP9Q0Z7S8 132 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 GOLT1AQ6ZVE7 132 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 C5orf17Q8NAS9 161 aa7.15□□□□□ -1.26
LIG1-213ENST00000596672 TRBV20OR9-2A0A075B6H5 130 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 IGHV3-16A0A0C4DH30 117 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 LOC100131303A0A0U1RQF7 123 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 PAX4O43316 350 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 TCRAP04437 139 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 GNG4P50150 75 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 LYPD5Q6UWN5 251 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 OCC1Q8TAD7 63 aa7.14□□□□□ -1.27
LIG1-213ENST00000596672 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 S100A2P29034 98 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 RPS10P46783 165 aaKnown RBP7.13□□□□□ -1.27
LIG1-213ENST00000596672 CSN1S1P47710 185 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 LINC00315P59091 139 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 UBE2G1P62253 170 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 TDRG1Q3Y452 100 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 DNLZQ5SXM8 178 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 SPATA12Q7Z6I5 190 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 RASL10AQ92737 203 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 ISOC2Q96AB3 205 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
LIG1-213ENST00000596672 YPEL4Q96NS1 127 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 973.6 ms