RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 SMIM3Q9BZL3 60 aa6.99□□□□□ -1.29
PNKP-208ENST00000596624 Q9HAA7 133 aa6.99□□□□□ -1.29
PNKP-208ENST00000596624 PSG8Q9UQ74 426 aa6.99□□□□□ -1.29
PNKP-208ENST00000596624 GCGP01275 180 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 IGHV3-30P01768 117 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
PNKP-208ENST00000596624 IGHV3-30-3P0DP02 117 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 IGHV3-30-5P0DP03 117 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 CDC34P49427 236 aaPredicted RBP6.98□□□□□ -1.29
PNKP-208ENST00000596624 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
PNKP-208ENST00000596624 SMUG1Q53HV7 270 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 DNLZQ5SXM8 178 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 COX8CQ7Z4L0 72 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 RAB24Q969Q5 203 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 PSMG3Q9BT73 122 aaPredicted RBP6.98□□□□□ -1.29
PNKP-208ENST00000596624 PARLQ9H300 379 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 RPH3ALQ9UNE2 315 aa6.98□□□□□ -1.29
PNKP-208ENST00000596624 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
PNKP-208ENST00000596624 A0A087WWC5 75 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 IGKV3D-20A0A0C4DH25 116 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 A8MWV9 139 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 K7EQM0 130 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 GCHFRP30047 84 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 SERF2P84101 59 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 FLI1Q01543 452 aaPredicted RBP6.97□□□□□ -1.29
PNKP-208ENST00000596624 SAPCD1Q5SSQ6 148 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 Q8N3U1 123 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 DEFB104AQ8WTQ1 72 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 SGK494Q96LW2 274 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 COX11Q9Y6N1 276 aa6.97□□□□□ -1.29
PNKP-208ENST00000596624 IGHV3-73A0A0B4J1V6 119 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 A0A1W2PRE2 83 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 RNF222A6NCQ9 220 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 HMGB3O15347 200 aaKnown RBP6.96□□□□□ -1.3
PNKP-208ENST00000596624 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
PNKP-208ENST00000596624 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 CYB561D1Q8N8Q1 229 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 AQP10Q96PS8 301 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 TMEM167BQ9NRX6 74 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 IL36BQ9NZH7 164 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 Q9UF83 564 aa6.96□□□□□ -1.3
PNKP-208ENST00000596624 SSNA1O43805 119 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 MBP02144 154 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
PNKP-208ENST00000596624 DAZ4Q86SG3 579 aaKnown RBP6.95□□□□□ -1.3
PNKP-208ENST00000596624 NIT1Q86X76 327 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 CHCHD7Q9BUK0 85 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 DAZ3Q9NR90 486 aaKnown RBP6.95□□□□□ -1.3
PNKP-208ENST00000596624 TNFSF18Q9UNG2 199 aa6.95□□□□□ -1.3
PNKP-208ENST00000596624 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 A6NHS1 94 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 FABP5P3A8MUU1 101 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 J3QL48 77 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 CXorf1O96002 111 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 ATP6V0CP27449 155 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 ZFP69Q49AA0 526 aa6.94□□□□□ -1.3
PNKP-208ENST00000596624 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 GAGE12JA6NER3 117 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 RHODO00212 210 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 SEC11BP0C7V7 166 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 CRIP1P50238 77 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 GAGE1Q13065 139 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 GAGE4Q13068 117 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 GAGE5Q13069 117 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 GAGE13Q4V321 117 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 DMRTA1Q5VZB9 504 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 SCXQ7RTU7 201 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 PRNTQ86SH4 94 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 C14orf178Q8N769 122 aaPredicted RBP6.93□□□□□ -1.3
PNKP-208ENST00000596624 Q8N976 141 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 CHAC1Q9BUX1 264 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 JPT2Q9H910 190 aa6.93□□□□□ -1.3
PNKP-208ENST00000596624 ASIPP42127 132 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 DEFA1P59665 94 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 DEFA3P59666 94 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 HSD17B11Q8NBQ5 300 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 RMI2Q96E14 147 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 ACTR3CQ9C0K3 210 aaPredicted RBP6.92□□□□□ -1.3
PNKP-208ENST00000596624 ARL2-SNX15V9GYD0 113 aa6.92□□□□□ -1.3
PNKP-208ENST00000596624 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 TRBV10-1A0A0K0K1A3 114 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 TRBV6-1A0A0K0K1D8 114 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 KRBOX1C9JBD0 128 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 LECT2O14960 151 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 OXTP01178 125 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 S100A4P26447 101 aaKnown RBP6.91□□□□□ -1.3
PNKP-208ENST00000596624 ZNF726P1Q15940 193 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
PNKP-208ENST00000596624 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 OR2T35Q8NGX2 323 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 HIST1H2BAQ96A08 127 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 SFRP2Q96HF1 295 aa6.91□□□□□ -1.3
PNKP-208ENST00000596624 DNAJC30Q96LL9 226 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms