RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZC2HC1AQ96GY0 325 aa8.94□□□□□ -0.98
USE1-207ENST00000596136 TRAV1-1A0A0B4J248 108 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 C9JCJ5 164 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 SIVA1O15304 175 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 PFDN1O60925 122 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 NXPH4O95158 308 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 S100A9P06702 114 aaKnown RBP8.93□□□□□ -0.98
USE1-207ENST00000596136 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 UBE2G1P62253 170 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 TNP2Q05952 138 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 ZNF674Q2M3X9 581 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 ZNF506Q5JVG8 444 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 IL36BQ9NZH7 164 aa8.93□□□□□ -0.98
USE1-207ENST00000596136 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 KRBOX1C9JBD0 128 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 C1QBP02746 253 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 SRIP30626 198 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 RAB5CP51148 216 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 TIRAPP58753 221 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 SH2D6Q7Z4S9 175 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
USE1-207ENST00000596136 TXNDC17Q9BRA2 123 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 MLST8Q9BVC4 326 aa8.92□□□□□ -0.98
USE1-207ENST00000596136 B4DEV8 164 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 SH2D1AO60880 128 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 ASIPP42127 132 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 AKR1C3P42330 323 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 EIF5AL1Q6IS14 154 aaKnown RBP8.91□□□□□ -0.98
USE1-207ENST00000596136 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 SLC25A29Q8N8R3 303 aa8.91□□□□□ -0.98
USE1-207ENST00000596136 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 A0A1B0GV50 99 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 K7EP13 123 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 S100A4P26447 101 aaKnown RBP8.9□□□□□ -0.98
USE1-207ENST00000596136 CCL20P78556 96 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 RYR1P21817 5038 aa8.9□□□□□ -0.98
USE1-207ENST00000596136 SCO2A0A1W2PP80 73 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 A8MWV9 139 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 MGST1P10620 155 aaKnown RBP8.89□□□□□ -0.99
USE1-207ENST00000596136 SULT1A2P50226 295 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 RHOHQ15669 191 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 UFSP1Q6NVU6 142 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
USE1-207ENST00000596136 SLC51BQ86UW2 128 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 PARLQ9H300 379 aa8.89□□□□□ -0.99
USE1-207ENST00000596136 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 LINC00315P59091 139 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 C11orf52Q96A22 123 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 PRADC1Q9BSG0 188 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
USE1-207ENST00000596136 IGHV3-73A0A0B4J1V6 119 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 H3BVH4 76 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 M0R036 132 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 CXCL1P09341 107 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 Q6ZSN1 163 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 WFDC10BQ8IUB3 73 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 LY96Q9Y6Y9 160 aa8.87□□□□□ -0.99
USE1-207ENST00000596136 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 NHLRC2Q8NBF2 726 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 SYT8Q8NBV8 401 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 JPT2Q9H910 190 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 GNG13Q9P2W3 67 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 BOLA1Q9Y3E2 137 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
USE1-207ENST00000596136 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
USE1-207ENST00000596136 RPL35P42766 123 aaKnown RBP8.85□□□□□ -0.99
USE1-207ENST00000596136 AKAP14Q86UN6 197 aa8.85□□□□□ -0.99
USE1-207ENST00000596136 SFRP2Q96HF1 295 aa8.85□□□□□ -0.99
USE1-207ENST00000596136 SAMD10Q9BYL1 202 aa8.85□□□□□ -0.99
USE1-207ENST00000596136 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 RHODO00212 210 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 CRYGDP07320 174 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 EVI2AP22794 236 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 C9orf62Q8N4C0 152 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 SSBP4Q9BWG4 385 aaPredicted RBP8.84□□□□□ -0.99
USE1-207ENST00000596136 GTSF1LQ9H1H1 148 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
USE1-207ENST00000596136 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
USE1-207ENST00000596136 IGLV2-8P01709 118 aa8.83□□□□□ -1
USE1-207ENST00000596136 LINC01556Q5JQF7 62 aa8.83□□□□□ -1
USE1-207ENST00000596136 LELP1Q5T871 98 aa8.83□□□□□ -1
USE1-207ENST00000596136 ZFP82Q8N141 532 aa8.83□□□□□ -1
USE1-207ENST00000596136 ATP6V0E2Q8NHE4 81 aa8.83□□□□□ -1
USE1-207ENST00000596136 DERL1Q9BUN8 251 aa8.83□□□□□ -1
USE1-207ENST00000596136 Q9UF83 564 aa8.83□□□□□ -1
USE1-207ENST00000596136 TNFRSF18Q9Y5U5 241 aa8.83□□□□□ -1
USE1-207ENST00000596136 SNAI2O43623 268 aa8.82□□□□□ -1
USE1-207ENST00000596136 PDE6DO43924 150 aa8.82□□□□□ -1
USE1-207ENST00000596136 RPL19P84098 196 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms