RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 SRIP30626 198 aa10.38□□□□□ -0.75
TRIM28-205ENST00000595028 AKR1C3P42330 323 aa10.38□□□□□ -0.75
TRIM28-205ENST00000595028 ZNF876PQ49A33 203 aa10.38□□□□□ -0.75
TRIM28-205ENST00000595028 ZFP30Q9Y2G7 519 aa10.38□□□□□ -0.75
TRIM28-205ENST00000595028 FABP5P3A8MUU1 101 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 NXPH4O95158 308 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 LTAP01374 205 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
TRIM28-205ENST00000595028 ZNF506Q5JVG8 444 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 NEGR1Q7Z3B1 354 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 PTH2Q96A98 100 aa10.37□□□□□ -0.75
TRIM28-205ENST00000595028 RS1O15537 224 aa10.36□□□□□ -0.75
TRIM28-205ENST00000595028 SH2D1AO60880 128 aa10.36□□□□□ -0.75
TRIM28-205ENST00000595028 ASIPP42127 132 aa10.36□□□□□ -0.75
TRIM28-205ENST00000595028 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
TRIM28-205ENST00000595028 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
TRIM28-205ENST00000595028 PGPEP1LA6NFU8 196 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 B4DEV8 164 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 SIVA1O15304 175 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
TRIM28-205ENST00000595028 CRIP1P50238 77 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 TNP2Q05952 138 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 LGALSLQ3ZCW2 172 aaPredicted RBP10.35□□□□□ -0.75
TRIM28-205ENST00000595028 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 TXNDC17Q9BRA2 123 aa10.35□□□□□ -0.75
TRIM28-205ENST00000595028 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 SCO2A0A1W2PP80 73 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 M0R036 132 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 CIDEAO60543 219 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 C1QBP02746 253 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 ZNF674Q2M3X9 581 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 EIF5AL1Q6IS14 154 aaKnown RBP10.34□□□□□ -0.75
TRIM28-205ENST00000595028 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
TRIM28-205ENST00000595028 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 H3BVH4 76 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 S100A9P06702 114 aaKnown RBP10.33□□□□□ -0.76
TRIM28-205ENST00000595028 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
TRIM28-205ENST00000595028 RAB5CP51148 216 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 RHOHQ15669 191 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 PIK3CD-AS1Q5SR53 167 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 NHLRC2Q8NBF2 726 aa10.33□□□□□ -0.76
TRIM28-205ENST00000595028 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 TRAV1-1A0A0B4J248 108 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 SH2D6Q7Z4S9 175 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 ZNF575Q86XF7 245 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 SLC25A29Q8N8R3 303 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 MANBALQ9NQG1 85 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 LRP1BQ9NZR2 4599 aa10.32□□□□□ -0.76
TRIM28-205ENST00000595028 A8MWV9 139 aa10.31□□□□□ -0.76
TRIM28-205ENST00000595028 SULT1A2P50226 295 aa10.31□□□□□ -0.76
TRIM28-205ENST00000595028 LINC00315P59091 139 aa10.31□□□□□ -0.76
TRIM28-205ENST00000595028 PARLQ9H300 379 aa10.31□□□□□ -0.76
TRIM28-205ENST00000595028 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
TRIM28-205ENST00000595028 APOBP04114 4563 aaKnown RBP10.31□□□□□ -0.76
TRIM28-205ENST00000595028 GRIFINA4D1Z8 144 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 ARMS2P0C7Q2 107 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 MGST1P10620 155 aaKnown RBP10.3□□□□□ -0.76
TRIM28-205ENST00000595028 TIRAPP58753 221 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 CCL20P78556 96 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 SLC51BQ86UW2 128 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
TRIM28-205ENST00000595028 TMSB15BA0A087X1C1 80 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 C11orf52Q96A22 123 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 SCRT2Q9NQ03 307 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 LY96Q9Y6Y9 160 aa10.29□□□□□ -0.76
TRIM28-205ENST00000595028 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 RPL35P42766 123 aaKnown RBP10.28□□□□□ -0.76
TRIM28-205ENST00000595028 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 BAGE2Q86Y30 109 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 JPT2Q9H910 190 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
TRIM28-205ENST00000595028 RHODO00212 210 aa10.27□□□□□ -0.77
TRIM28-205ENST00000595028 Q6ZRN7 208 aaPredicted RBP10.27□□□□□ -0.77
TRIM28-205ENST00000595028 Q6ZSN1 163 aa10.27□□□□□ -0.77
TRIM28-205ENST00000595028 MAPKAPK5-AS1Q8N8E1 139 aa10.27□□□□□ -0.77
TRIM28-205ENST00000595028 SAMD10Q9BYL1 202 aa10.27□□□□□ -0.77
TRIM28-205ENST00000595028 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
TRIM28-205ENST00000595028 K7EP13 123 aa10.26□□□□□ -0.77
TRIM28-205ENST00000595028 CXCL1P09341 107 aa10.26□□□□□ -0.77
TRIM28-205ENST00000595028 LINC00694P0DN24 101 aa10.26□□□□□ -0.77
TRIM28-205ENST00000595028 RPL19P84098 196 aaKnown RBP10.26□□□□□ -0.77
TRIM28-205ENST00000595028 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
TRIM28-205ENST00000595028 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
TRIM28-205ENST00000595028 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
TRIM28-205ENST00000595028 M0R381 172 aa10.25□□□□□ -0.77
TRIM28-205ENST00000595028 IFNA1P01562 189 aa10.25□□□□□ -0.77
TRIM28-205ENST00000595028 BCL2P10415 239 aa10.25□□□□□ -0.77
TRIM28-205ENST00000595028 EVI2AP22794 236 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms