RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 IGHG2P01859 326 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 AMN1Q8IY45 258 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 FAM223BA6NKX1 122 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 FAM223AQ8IWN6 122 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 C8orf49Q96NF6 230 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 TEX15Q9BXT5 2789 aa13.06□□□□□ -0.32
SHKBP1-205ENST00000594973 LINC01619G3V211 115 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 FXYD7P58549 80 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 DEFB112Q30KQ8 113 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 TMEM95Q3KNT9 176 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 ATP5LO75964 103 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 DPM2O94777 84 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 IGHV3-11P01762 117 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 Q6ZUT4 128 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 TTTY13Q9BZ97 58 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 KLK15Q9H2R5 256 aa13.05□□□□□ -0.32
SHKBP1-205ENST00000594973 ZNF469Q96JG9 3925 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 FCER1GP30273 86 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 ARL3P36405 182 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 METTL26Q96S19 204 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 NPYP01303 97 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 PF4V1P10720 104 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 CKS2P33552 79 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 CRIP1P50238 77 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 TWIST1Q15672 202 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 RNF183Q96D59 192 aa13.04□□□□□ -0.32
SHKBP1-205ENST00000594973 TMEM213A2RRL7 107 aa13.03□□□□□ -0.32
SHKBP1-205ENST00000594973 IGHG4P01861 327 aa13.03□□□□□ -0.32
SHKBP1-205ENST00000594973 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
SHKBP1-205ENST00000594973 Q8TAT8 98 aa13.03□□□□□ -0.32
SHKBP1-205ENST00000594973 MT-ATP8P03928 68 aa13.02□□□□□ -0.32
SHKBP1-205ENST00000594973 GAGE5Q13069 117 aa13.02□□□□□ -0.32
SHKBP1-205ENST00000594973 GAGE6Q13070 117 aa13.02□□□□□ -0.32
SHKBP1-205ENST00000594973 CFAP126Q5VTH2 177 aa13.02□□□□□ -0.32
SHKBP1-205ENST00000594973 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
SHKBP1-205ENST00000594973 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
SHKBP1-205ENST00000594973 MAP1LC3AQ9H492 121 aa13.02□□□□□ -0.33
SHKBP1-205ENST00000594973 PRSS1P07477 247 aa13.01□□□□□ -0.33
SHKBP1-205ENST00000594973 DEFB113Q30KQ7 82 aa13.01□□□□□ -0.33
SHKBP1-205ENST00000594973 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
SHKBP1-205ENST00000594973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.01□□□□□ -0.33
SHKBP1-205ENST00000594973 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
SHKBP1-205ENST00000594973 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
SHKBP1-205ENST00000594973 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 TRBV7-3A0A075B6L6 115 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 PRAC2D3DTV9 90 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 LEPP41159 167 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 XGP55808 180 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
SHKBP1-205ENST00000594973 HIST1H4GQ99525 98 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 ANAPC13Q9BS18 74 aa13□□□□□ -0.33
SHKBP1-205ENST00000594973 TMSB15BA0A087X1C1 80 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 J3QLI3 93 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 ERCC8Q13216 396 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 PPDPFLQ8WWR9 84 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 PRR25Q96S07 402 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 SS18L2Q9UHA2 77 aa12.99□□□□□ -0.33
SHKBP1-205ENST00000594973 DOPEY2Q9Y3R5 2298 aa12.98□□□□□ -0.33
SHKBP1-205ENST00000594973 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-205ENST00000594973 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
SHKBP1-205ENST00000594973 FOXC2Q99958 501 aa12.98□□□□□ -0.33
SHKBP1-205ENST00000594973 CCDC168Q8NDH2 2452 aa12.98□□□□□ -0.33
SHKBP1-205ENST00000594973 K7EMI3 77 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 BEX4Q9NWD9 120 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 H3BUA1 57 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 SH2D1AO60880 128 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 Q96MF0 132 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 U3KQE9 123 aa12.97□□□□□ -0.33
SHKBP1-205ENST00000594973 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
SHKBP1-205ENST00000594973 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-205ENST00000594973 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
SHKBP1-205ENST00000594973 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-205ENST00000594973 FHL3Q13643 280 aa12.96□□□□□ -0.34
SHKBP1-205ENST00000594973 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.34
SHKBP1-205ENST00000594973 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.34
SHKBP1-205ENST00000594973 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 NDUFA4O00483 81 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
SHKBP1-205ENST00000594973 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 BRI3O95415 125 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 CFHR3Q02985 330 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 TMEM160Q9NX00 188 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 CR1P17927 2039 aa12.94□□□□□ -0.34
SHKBP1-205ENST00000594973 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms