RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 IGKV3D-20A0A0C4DH25 116 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 LAGE3Q14657 143 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 LINC01620Q4KN68 170 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 FAM74A1Q5RGS3 127 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
USE1-203ENST00000593597 ATP6V0E2Q8NHE4 81 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 PTH2Q96A98 100 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 SAMD10Q9BYL1 202 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 GTSF1LQ9H1H1 148 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 PARLQ9H300 379 aa7.03□□□□□ -1.28
USE1-203ENST00000593597 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
USE1-203ENST00000593597 A0A1W2PPV4 95 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 SSNA1O43805 119 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 C1QBP02746 253 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 GCHFRP30047 84 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 CDC34P49427 236 aaPredicted RBP7.02□□□□□ -1.29
USE1-203ENST00000593597 C14orf178Q8N769 122 aaPredicted RBP7.02□□□□□ -1.29
USE1-203ENST00000593597 C5orf17Q8NAS9 161 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 OR2G3Q8NGZ4 309 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 RAB24Q969Q5 203 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 LINC00479Q96M42 142 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 SH3BGRL3Q9H299 93 aa7.02□□□□□ -1.29
USE1-203ENST00000593597 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 PET100P0DJ07 73 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 MGST1P10620 155 aaKnown RBP7.01□□□□□ -1.29
USE1-203ENST00000593597 ATP6V0CP27449 155 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 GAGE1Q13065 139 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 GAGE4Q13068 117 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 GAGE5Q13069 117 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 GAGE13Q4V321 117 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 HSD17B11Q8NBQ5 300 aa7.01□□□□□ -1.29
USE1-203ENST00000593597 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
USE1-203ENST00000593597 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
USE1-203ENST00000593597 SERTM2A0A1B0GWG4 89 aa7□□□□□ -1.29
USE1-203ENST00000593597 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
USE1-203ENST00000593597 TAAR5O14804 337 aa7□□□□□ -1.29
USE1-203ENST00000593597 CIDEAO60543 219 aa7□□□□□ -1.29
USE1-203ENST00000593597 FLI1Q01543 452 aaPredicted RBP7□□□□□ -1.29
USE1-203ENST00000593597 ZNF726P1Q15940 193 aa7□□□□□ -1.29
USE1-203ENST00000593597 SMUG1Q53HV7 270 aa7□□□□□ -1.29
USE1-203ENST00000593597 SCXQ7RTU7 201 aa7□□□□□ -1.29
USE1-203ENST00000593597 NDFIP1Q9BT67 221 aa7□□□□□ -1.29
USE1-203ENST00000593597 EPDR1Q9UM22 224 aa7□□□□□ -1.29
USE1-203ENST00000593597 A6NHS1 94 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 CRIP1P50238 77 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 SUMO1P63165 101 aaKnown RBP6.99□□□□□ -1.29
USE1-203ENST00000593597 Q5BKY6 102 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 ZFP2Q6ZN57 461 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 CYB561D1Q8N8Q1 229 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 OR2T35Q8NGX2 323 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 BAALCQ8WXS3 180 aa6.99□□□□□ -1.29
USE1-203ENST00000593597 PSMG3Q9BT73 122 aaPredicted RBP6.99□□□□□ -1.29
USE1-203ENST00000593597 J3QL48 77 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 DMRTA1Q5VZB9 504 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 Q86TA4 180 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 AQP10Q96PS8 301 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 ALG5Q9Y673 324 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 ARL2-SNX15V9GYD0 113 aa6.98□□□□□ -1.29
USE1-203ENST00000593597 H3BVH4 76 aa6.97□□□□□ -1.29
USE1-203ENST00000593597 PIK3CD-AS1Q5SR53 167 aa6.97□□□□□ -1.29
USE1-203ENST00000593597 NIT1Q86X76 327 aa6.97□□□□□ -1.29
USE1-203ENST00000593597 ZC2HC1AQ96GY0 325 aa6.97□□□□□ -1.29
USE1-203ENST00000593597 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
USE1-203ENST00000593597 RNF222A6NCQ9 220 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 A8MWV9 139 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 CXorf1O96002 111 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 LGALSLQ3ZCW2 172 aaPredicted RBP6.96□□□□□ -1.3
USE1-203ENST00000593597 ZFP69Q49AA0 526 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 DNLZQ5SXM8 178 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 IL36BQ9NZH7 164 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 BOLA1Q9Y3E2 137 aa6.96□□□□□ -1.3
USE1-203ENST00000593597 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 GRIFINA4D1Z8 144 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 KRBOX1C9JBD0 128 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 K7EQM0 130 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 PEX7O00628 323 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
USE1-203ENST00000593597 ASIPP42127 132 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 UBE2G2P60604 165 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 SAPCD1Q5SSQ6 148 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
USE1-203ENST00000593597 CIRBP-AS1Q8TBR5 109 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 TMEM167BQ9NRX6 74 aa6.95□□□□□ -1.3
USE1-203ENST00000593597 A0A087WWL8 130 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 FAM74A7A6NL05 159 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 FABP5P3A8MUU1 101 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 B4DEV8 164 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 M0R036 132 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 SH2D1AO60880 128 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 ARMS2P0C7Q2 107 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 S100A4P26447 101 aaKnown RBP6.94□□□□□ -1.3
USE1-203ENST00000593597 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
USE1-203ENST00000593597 SERF2P84101 59 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 COX8CQ7Z4L0 72 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 ACTR3CQ9C0K3 210 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms