RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 GAGE4Q13068 117 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 GAGE5Q13069 117 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 BAALCQ8WXS3 180 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
RETREG3-212ENST00000593251 LRP1Q07954 4544 aaKnown RBP11.52□□□□□ -0.56
RETREG3-212ENST00000593251 SSNA1O43805 119 aa11.52□□□□□ -0.57
RETREG3-212ENST00000593251 UPK1BO75841 260 aa11.52□□□□□ -0.57
RETREG3-212ENST00000593251 TCRAP04437 139 aa11.52□□□□□ -0.57
RETREG3-212ENST00000593251 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
RETREG3-212ENST00000593251 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.57
RETREG3-212ENST00000593251 Q9UF83 564 aa11.52□□□□□ -0.57
RETREG3-212ENST00000593251 TRAV8-3A0A0A6YYJ7 113 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 SERTM2A0A1B0GWG4 89 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 K7EQM0 130 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 IFITM3Q01628 133 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 PRNTQ86SH4 94 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 C5orf17Q8NAS9 161 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 PARLQ9H300 379 aa11.51□□□□□ -0.57
RETREG3-212ENST00000593251 IGLV2-11P01706 119 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 CDC34P49427 236 aaPredicted RBP11.5□□□□□ -0.57
RETREG3-212ENST00000593251 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 SCXQ7RTU7 201 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 PTH2Q96A98 100 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 JPT2Q9H910 190 aa11.5□□□□□ -0.57
RETREG3-212ENST00000593251 STAG3L2P0CL84 134 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 STAG3L3P0CL85 134 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 FLI1Q01543 452 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-212ENST00000593251 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 MARVELD1Q9BSK0 173 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
RETREG3-212ENST00000593251 GGTLC3B5MD39 225 aa11.48□□□□□ -0.57
RETREG3-212ENST00000593251 GCHFRP30047 84 aa11.48□□□□□ -0.57
RETREG3-212ENST00000593251 SUMO1P63165 101 aaKnown RBP11.48□□□□□ -0.57
RETREG3-212ENST00000593251 LGALSLQ3ZCW2 172 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-212ENST00000593251 TOR2AQ5JU69 321 aa11.48□□□□□ -0.57
RETREG3-212ENST00000593251 C14orf178Q8N769 122 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-212ENST00000593251 FAT3Q8TDW7 4589 aa11.48□□□□□ -0.57
RETREG3-212ENST00000593251 HMCN2Q8NDA2 5059 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 ZFP2Q6ZN57 461 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 HSD17B11Q8NBQ5 300 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 RAB24Q969Q5 203 aa11.47□□□□□ -0.57
RETREG3-212ENST00000593251 A8MWV9 139 aa11.46□□□□□ -0.57
RETREG3-212ENST00000593251 S100A4P26447 101 aaKnown RBP11.46□□□□□ -0.57
RETREG3-212ENST00000593251 SUN5Q8TC36 379 aa11.46□□□□□ -0.57
RETREG3-212ENST00000593251 LINC00479Q96M42 142 aa11.46□□□□□ -0.57
RETREG3-212ENST00000593251 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
RETREG3-212ENST00000593251 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
RETREG3-212ENST00000593251 TRAV34A0A0B4J273 112 aa11.45□□□□□ -0.58
RETREG3-212ENST00000593251 KRTAP10-4P60372 401 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-212ENST00000593251 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
RETREG3-212ENST00000593251 A0A087WWC5 75 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 ASIPP42127 132 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 DEFA1P59665 94 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 DEFA3P59666 94 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 OR2G3Q8NGZ4 309 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 KLK12Q9UKR0 248 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
RETREG3-212ENST00000593251 RNF222A6NCQ9 220 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 H3BVH4 76 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 FGF8P55075 233 aaPredicted RBP11.43□□□□□ -0.58
RETREG3-212ENST00000593251 NIT1Q86X76 327 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 Q8N976 141 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 RMI2Q96E14 147 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
RETREG3-212ENST00000593251 MBP02144 154 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 ATP6V0CP27449 155 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 TMEM167BQ9NRX6 74 aa11.42□□□□□ -0.58
RETREG3-212ENST00000593251 UBR4Q5T4S7 5183 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 PKHD1L1Q86WI1 4243 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 FABP5P3A8MUU1 101 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 CXorf1O96002 111 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 PIK3CD-AS1Q5SR53 167 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 SERTAD4-AS1Q5TG53 156 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
RETREG3-212ENST00000593251 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
RETREG3-212ENST00000593251 GRIFINA4D1Z8 144 aa11.4□□□□□ -0.58
RETREG3-212ENST00000593251 B4DEV8 164 aa11.4□□□□□ -0.58
RETREG3-212ENST00000593251 M0R036 132 aa11.4□□□□□ -0.58
RETREG3-212ENST00000593251 SERF2P84101 59 aa11.4□□□□□ -0.58
RETREG3-212ENST00000593251 SYT8Q8NBV8 401 aa11.4□□□□□ -0.58
RETREG3-212ENST00000593251 A0A087WWL8 130 aa11.39□□□□□ -0.59
RETREG3-212ENST00000593251 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
RETREG3-212ENST00000593251 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms