RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PTH2Q96A98 100 aa10.5□□□□□ -0.73
DDX39A-221ENST00000593026 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
DDX39A-221ENST00000593026 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 C9JQL5 133 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 K7EN84 100 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 OR2D3Q8NGH3 330 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
DDX39A-221ENST00000593026 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 RPS20P60866 119 aaKnown RBP10.48□□□□□ -0.73
DDX39A-221ENST00000593026 FAM74A3Q4VXF1 159 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 SYT8Q8NBV8 401 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 PHLDA3Q9Y5J5 127 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 MUC4Q99102 2169 aa10.48□□□□□ -0.73
DDX39A-221ENST00000593026 RYR3Q15413 4870 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 TRGV4A0A0C4DH28 118 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 A0A0J9YY99 117 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 LCE6AA0A183 80 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 XKRY2A2RUG3 117 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 PIK3CD-AS1Q5SR53 167 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 RNASE7Q9H1E1 156 aaKnown RBP10.47□□□□□ -0.73
DDX39A-221ENST00000593026 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
DDX39A-221ENST00000593026 DYNC2H1Q8NCM8 4307 aaKnown RBP10.47□□□□□ -0.73
DDX39A-221ENST00000593026 M0R381 172 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 SLAQ13239 276 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 FHL2Q14192 279 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 CFAP126Q5VTH2 177 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 ZFP82Q8N141 532 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 LINC00476Q8WZB0 136 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.73
DDX39A-221ENST00000593026 PRO0255Q9UI72 69 aa10.46□□□□□ -0.73
DDX39A-221ENST00000593026 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
DDX39A-221ENST00000593026 A8MWV9 139 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 RS1O15537 224 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 SNAI2O43623 268 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 NUDT3O95989 172 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 GZMBP10144 247 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 TMEM241Q24JQ0 296 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 SOHLH1Q5JUK2 328 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
DDX39A-221ENST00000593026 H3BNG1 76 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 PAX4O43316 350 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 CIDEAO60543 219 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 LY6G6CO95867 125 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 LGALS9CQ6DKI2 356 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 FAM231DQ6ZW35 169 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 SSBP4Q9BWG4 385 aaPredicted RBP10.44□□□□□ -0.74
DDX39A-221ENST00000593026 NAT8Q9UHE5 227 aa10.44□□□□□ -0.74
DDX39A-221ENST00000593026 GATCO43716 136 aaKnown RBP10.43□□□□□ -0.74
DDX39A-221ENST00000593026 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
DDX39A-221ENST00000593026 CRYBA4P53673 196 aa10.43□□□□□ -0.74
DDX39A-221ENST00000593026 SPANXN1Q5VSR9 72 aa10.43□□□□□ -0.74
DDX39A-221ENST00000593026 VSIG2Q96IQ7 327 aa10.43□□□□□ -0.74
DDX39A-221ENST00000593026 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 MUC21A0A0G2JKD1 596 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 MUC21A0A140T8X8 626 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 NXPH4O95158 308 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 P0DMU3 169 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 FAM231AP0DMU4 169 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 FAM231CP0DMU5 169 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
DDX39A-221ENST00000593026 ADIRFQ15847 76 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 JPT2Q9H910 190 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
DDX39A-221ENST00000593026 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
DDX39A-221ENST00000593026 RHODO00212 210 aa10.41□□□□□ -0.74
DDX39A-221ENST00000593026 GATA1P15976 413 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-221ENST00000593026 ZFP2Q6ZN57 461 aa10.41□□□□□ -0.74
DDX39A-221ENST00000593026 SFRP2Q96HF1 295 aa10.41□□□□□ -0.74
DDX39A-221ENST00000593026 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
DDX39A-221ENST00000593026 A8MWL6 223 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 F2Z2F3 143 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 SSTP61278 116 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 CT83Q5H943 113 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 ISOC2Q96AB3 205 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
DDX39A-221ENST00000593026 A0A087WWL8 130 aa10.39□□□□□ -0.75
DDX39A-221ENST00000593026 CACNG7P62955 275 aa10.39□□□□□ -0.75
DDX39A-221ENST00000593026 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
DDX39A-221ENST00000593026 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
DDX39A-221ENST00000593026 LYZL1Q6UWQ5 148 aa10.39□□□□□ -0.75
DDX39A-221ENST00000593026 LYSTQ99698 3801 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms