RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 H3BVH4 76 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 K7EQD1 137 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 GYPEP15421 78 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 S100A4P26447 101 aaKnown RBP10.82□□□□□ -0.68
LIG3-215ENST00000592690 ASIPP42127 132 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
LIG3-215ENST00000592690 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 TEX46H3BTG2 121 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 RS1O15537 224 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 S100A9P06702 114 aaKnown RBP10.81□□□□□ -0.68
LIG3-215ENST00000592690 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
LIG3-215ENST00000592690 MRPL23Q16540 153 aaKnown RBP10.81□□□□□ -0.68
LIG3-215ENST00000592690 ZNF575Q86XF7 245 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 PTH2Q96A98 100 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 DERL1Q9BUN8 251 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
LIG3-215ENST00000592690 TMSB15BA0A087X1C1 80 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 IGHV3-73A0A0B4J1V6 119 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 PRSS29PA6NIE9 313 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 NKX2-5P52952 324 aaPredicted RBP10.8□□□□□ -0.68
LIG3-215ENST00000592690 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 C1orf134Q5TEV5 83 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 PCNPQ8WW12 178 aaKnown RBP10.8□□□□□ -0.68
LIG3-215ENST00000592690 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 MLST8Q9BVC4 326 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
LIG3-215ENST00000592690 ARMS2P0C7Q2 107 aa10.79□□□□□ -0.68
LIG3-215ENST00000592690 SRIP30626 198 aa10.79□□□□□ -0.68
LIG3-215ENST00000592690 RPL35P42766 123 aaKnown RBP10.79□□□□□ -0.68
LIG3-215ENST00000592690 LYPD5Q6UWN5 251 aa10.79□□□□□ -0.68
LIG3-215ENST00000592690 ALKAL2Q6UX46 152 aa10.79□□□□□ -0.68
LIG3-215ENST00000592690 NEGR1Q7Z3B1 354 aa10.79□□□□□ -0.68
LIG3-215ENST00000592690 A0A1B0GVY2 172 aa10.78□□□□□ -0.68
LIG3-215ENST00000592690 NXPH4O95158 308 aa10.78□□□□□ -0.68
LIG3-215ENST00000592690 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
LIG3-215ENST00000592690 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
LIG3-215ENST00000592690 PARLQ9H300 379 aa10.78□□□□□ -0.68
LIG3-215ENST00000592690 JPT2Q9H910 190 aa10.78□□□□□ -0.68
LIG3-215ENST00000592690 IFNA1P01562 189 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 BCL2P10415 239 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.69
LIG3-215ENST00000592690 SOHLH1Q5JUK2 328 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 PRR27Q6MZM9 219 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 C6orf223Q8N319 242 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 TXNDC17Q9BRA2 123 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
LIG3-215ENST00000592690 A8MWV9 139 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 CIDEAO60543 219 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 CENPWQ5EE01 88 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 TTC32Q5I0X7 151 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 SAMD10Q9BYL1 202 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
LIG3-215ENST00000592690 RAB19A4D1S5 217 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 SIVA1O15304 175 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 RHOHQ15669 191 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 Q6ZSN1 163 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 HERC2O95714 4834 aa10.75□□□□□ -0.69
LIG3-215ENST00000592690 TRBV6-4A0A1B0GX49 114 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 PDE6DO43924 150 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 UFSP1Q6NVU6 142 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 SYT8Q8NBV8 401 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 VAX2Q9UIW0 290 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 PKD1P98161 4303 aa10.74□□□□□ -0.69
LIG3-215ENST00000592690 A0A1W2PPQ1 181 aa10.73□□□□□ -0.69
LIG3-215ENST00000592690 M0R381 172 aa10.73□□□□□ -0.69
LIG3-215ENST00000592690 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
LIG3-215ENST00000592690 WFDC10BQ8IUB3 73 aa10.73□□□□□ -0.69
LIG3-215ENST00000592690 MED9Q9NWA0 146 aa10.73□□□□□ -0.69
LIG3-215ENST00000592690 TRBV20OR9-2A0A075B6H5 130 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 CXCL1P09341 107 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 TNP2Q05952 138 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 ZFP82Q8N141 532 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 SFRP2Q96HF1 295 aa10.72□□□□□ -0.69
LIG3-215ENST00000592690 PKHD1P08F94 4074 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 A0A087WWL8 130 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
LIG3-215ENST00000592690 GNG4P50150 75 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 BLOC1S1P78537 153 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 C14orf178Q8N769 122 aaPredicted RBP10.71□□□□□ -0.69
LIG3-215ENST00000592690 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 Q9UF83 564 aa10.71□□□□□ -0.69
LIG3-215ENST00000592690 RHODO00212 210 aa10.7□□□□□ -0.7
LIG3-215ENST00000592690 SNAI2O43623 268 aa10.7□□□□□ -0.7
LIG3-215ENST00000592690 CRYGDP07320 174 aa10.7□□□□□ -0.7
LIG3-215ENST00000592690 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
LIG3-215ENST00000592690 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms