RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 IFNA1P01562 189 aa9.65□□□□□ -0.86
CLIP3-205ENST00000592017 S100A9P06702 114 aaKnown RBP9.65□□□□□ -0.86
CLIP3-205ENST00000592017 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
CLIP3-205ENST00000592017 SLAQ13239 276 aa9.65□□□□□ -0.86
CLIP3-205ENST00000592017 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
CLIP3-205ENST00000592017 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 H3BVH4 76 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 ESRGQ1W209 222 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 ZNF506Q5JVG8 444 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 BAGE2Q86Y30 109 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
CLIP3-205ENST00000592017 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
CLIP3-205ENST00000592017 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
CLIP3-205ENST00000592017 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
CLIP3-205ENST00000592017 BCL2P10415 239 aa9.62□□□□□ -0.87
CLIP3-205ENST00000592017 GYPEP15421 78 aa9.62□□□□□ -0.87
CLIP3-205ENST00000592017 SRIP30626 198 aa9.62□□□□□ -0.87
CLIP3-205ENST00000592017 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
CLIP3-205ENST00000592017 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
CLIP3-205ENST00000592017 MRPS16Q9Y3D3 137 aaKnown RBP9.62□□□□□ -0.87
CLIP3-205ENST00000592017 K7EQD1 137 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 RS1O15537 224 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 ARMS2P0C7Q2 107 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
CLIP3-205ENST00000592017 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
CLIP3-205ENST00000592017 LINC01559Q495D7 138 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 IL36BQ9NZH7 164 aa9.61□□□□□ -0.87
CLIP3-205ENST00000592017 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 NBDYA0A0U1RRE5 68 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 PDE6DO43924 150 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 GATA1P15976 413 aaPredicted RBP9.6□□□□□ -0.87
CLIP3-205ENST00000592017 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
CLIP3-205ENST00000592017 NEGR1Q7Z3B1 354 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 Q9H8V8 135 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 VAX2Q9UIW0 290 aa9.6□□□□□ -0.87
CLIP3-205ENST00000592017 NACAE9PAV3 2078 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 MGST1P10620 155 aaKnown RBP9.59□□□□□ -0.87
CLIP3-205ENST00000592017 SOHLH1Q5JUK2 328 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 PTH2Q96A98 100 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 MED9Q9NWA0 146 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 RYR1P21817 5038 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
CLIP3-205ENST00000592017 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 A8MWV9 139 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 M0R381 172 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 BLOC1S1P78537 153 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 DNLZQ5SXM8 178 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 PRADC1Q9BSG0 188 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 PARLQ9H300 379 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 JPT2Q9H910 190 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 MUC4Q99102 2169 aa9.58□□□□□ -0.88
CLIP3-205ENST00000592017 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 CIDEAO60543 219 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 NXPH4O95158 308 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
CLIP3-205ENST00000592017 GNG4P50150 75 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 RHOHQ15669 191 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 TTC32Q5I0X7 151 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 FAM74A4Q5TZK3 123 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
CLIP3-205ENST00000592017 TNP2Q05952 138 aa9.56□□□□□ -0.88
CLIP3-205ENST00000592017 ZFP82Q8N141 532 aa9.56□□□□□ -0.88
CLIP3-205ENST00000592017 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
CLIP3-205ENST00000592017 A0A087WWL8 130 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 TRBV6-4A0A1B0GX49 114 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 C6orf223Q8N319 242 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
CLIP3-205ENST00000592017 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 SCRT2Q9NQ03 307 aa9.55□□□□□ -0.88
CLIP3-205ENST00000592017 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 MUC21A0A0G2JKD1 596 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 MUC21A0A140T8X8 626 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 RBFOX3A6NFN3 312 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 RHODO00212 210 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 SIVA1O15304 175 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 CXCL1P09341 107 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 MED14OSP0DP75 135 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 SSTP61278 116 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
CLIP3-205ENST00000592017 CEBPGP53567 150 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms