RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 DMXL2Q8TDJ6 3036 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 TMEM178BH3BS89 294 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 CFC1P0CG37 223 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 HERVK_113P61574 105 aa9.45□□□□□ -0.9
SMARCA4-217ENST00000591595 COX7A1P24310 79 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 Q86TA4 180 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 ZNF815PA8K554 130 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 ABCA4P78363 2273 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 C2orf48Q96LS8 159 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 APC2O95996 2303 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 SPENQ96T58 3664 aaKnown RBP9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 PFN2P35080 140 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 CTSZQ9UBR2 303 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 WNK2Q9Y3S1 2297 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 LAMA5O15230 3695 aa9.44□□□□□ -0.9
SMARCA4-217ENST00000591595 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 FSTL3O95633 263 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 NUP37Q8NFH4 326 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 SMG1Q96Q15 3661 aaKnown RBP9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 K7ENP7 123 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 IGHV1-8P0DP01 117 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 LOXP28300 417 aaPredicted RBP9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 NBASA2RRP1 2371 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 GP9P14770 177 aa9.43□□□□□ -0.9
SMARCA4-217ENST00000591595 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
SMARCA4-217ENST00000591595 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
SMARCA4-217ENST00000591595 J3QQQ9 107 aa9.42□□□□□ -0.9
SMARCA4-217ENST00000591595 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
SMARCA4-217ENST00000591595 IGHV4-39P01824 125 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 C8orf31Q8N9H6 132 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 S4R3C0 116 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 SLC25A16P16260 332 aa9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 RNASE6Q93091 150 aaKnown RBP9.41□□□□□ -0.9
SMARCA4-217ENST00000591595 ZFHX2Q9C0A1 2572 aaPredicted RBP9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 A0A0G2JNJ9 132 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 TMEM170BQ5T4T1 132 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 Q8N8P6 123 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 VKORC1Q9BQB6 163 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 Q9UFV3 132 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 LYNX1P0DP58 116 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 TCF15Q12870 199 aa9.4□□□□□ -0.9
SMARCA4-217ENST00000591595 ZNF785A8K8V0 405 aa9.4□□□□□ -0.91
SMARCA4-217ENST00000591595 H7C2G1 150 aa9.4□□□□□ -0.91
SMARCA4-217ENST00000591595 C17orf77Q96MU5 243 aa9.4□□□□□ -0.91
SMARCA4-217ENST00000591595 PRORYQ9H606 182 aa9.4□□□□□ -0.91
SMARCA4-217ENST00000591595 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 SCNM1Q9BWG6 230 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 ANKRD11Q6UB99 2663 aaPredicted RBP9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 MED13LQ71F56 2210 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 F8VRH5 84 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 P0DMU3 169 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 PRSS33Q8NF86 280 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 METTL26Q96S19 204 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 DMXL1Q9Y485 3027 aa9.39□□□□□ -0.91
SMARCA4-217ENST00000591595 IGHV1-3A0A0C4DH29 117 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 M0R3E3 92 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 ELANEP08246 267 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 IGFL3Q6UXB1 125 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 H7C1H1 209 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 ATOX1O00244 68 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 GFRALQ6UXV0 394 aa9.38□□□□□ -0.91
SMARCA4-217ENST00000591595 A0A1W2PRX2 142 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 MRGPRG-AS1Q2M3A8 158 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 AGPAT4-IT1Q9H0P7 198 aa9.37□□□□□ -0.91
SMARCA4-217ENST00000591595 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 Q1RN00 199 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 LINC00643Q86TS7 51 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
SMARCA4-217ENST00000591595 TEX22C9J3V5 150 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms