RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LOXL1Q08397 574 aaPredicted RBP11.2□□□□□ -0.62
RETREG3-208ENST00000589797 TEX29Q8N6K0 151 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
RETREG3-208ENST00000589797 AGRNO00468 2067 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 KRTAP10-9P60411 292 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 COTL1Q14019 142 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
RETREG3-208ENST00000589797 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 CRIP1P50238 77 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 C19orf71A6NCJ1 209 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 H7C1H1 209 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
RETREG3-208ENST00000589797 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 A0A087WW49 117 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
RETREG3-208ENST00000589797 IGHG2P01859 326 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
RETREG3-208ENST00000589797 PPP1R17O96001 155 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 NPC2P61916 151 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 Q6ZQT7 251 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 JPT2Q9H910 190 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
RETREG3-208ENST00000589797 VWC2LB2RUY7 222 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
RETREG3-208ENST00000589797 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 CDKN1BP46527 198 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 LINC01619G3V211 115 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
RETREG3-208ENST00000589797 CD28P10747 220 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
RETREG3-208ENST00000589797 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 ATRQ13535 2644 aa11.17□□□□□ -0.62
RETREG3-208ENST00000589797 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 K7EMI3 77 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 SAMD13Q5VXD3 122 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
RETREG3-208ENST00000589797 TP53TG1Q9Y2A0 90 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
RETREG3-208ENST00000589797 TRGV11A0A075B6L2 103 aa11.15□□□□□ -0.62
RETREG3-208ENST00000589797 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
RETREG3-208ENST00000589797 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
RETREG3-208ENST00000589797 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.63
RETREG3-208ENST00000589797 A6NDX4 124 aa11.15□□□□□ -0.63
RETREG3-208ENST00000589797 MBD6Q96DN6 1003 aa11.15□□□□□ -0.63
RETREG3-208ENST00000589797 VCYO14598 125 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 PCP2Q8IVA1 136 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 ZNF843Q8N446 348 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 SPCS1Q9Y6A9 102 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 MRAP2Q96G30 205 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 SPXQ9BT56 116 aa11.14□□□□□ -0.63
RETREG3-208ENST00000589797 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 ELANEP08246 267 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 F8P00451 2351 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 J3QLI3 93 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 J3QR89 54 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 EDN2P20800 178 aa11.13□□□□□ -0.63
RETREG3-208ENST00000589797 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
RETREG3-208ENST00000589797 MYCNOSP40205 109 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 EBI3Q14213 229 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 BBC3Q96PG8 261 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-208ENST00000589797 TEP1Q99973 2627 aaKnown RBP11.12□□□□□ -0.63
RETREG3-208ENST00000589797 NPSP0C0P6 89 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 Q8N8P6 123 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 SMIM2Q9BVW6 85 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 RELNP78509 3460 aa11.12□□□□□ -0.63
RETREG3-208ENST00000589797 TRAV13-1A0A0B4J241 112 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 DLEU1O43261 78 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
RETREG3-208ENST00000589797 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
RETREG3-208ENST00000589797 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 ZFAND3Q9H8U3 227 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 A6NJY4 79 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 PRM2P04554 102 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 Q8N6K4 173 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 MDFICQ9P1T7 246 aa11.11□□□□□ -0.63
RETREG3-208ENST00000589797 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
RETREG3-208ENST00000589797 CHCHD5Q9BSY4 110 aa11.1□□□□□ -0.63
RETREG3-208ENST00000589797 GAS8-AS1O95177 125 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms