RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 B4DEV8 164 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
H3F3B-207ENST00000589417 ASIPP42127 132 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
H3F3B-207ENST00000589417 CFAP126Q5VTH2 177 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 LINC00336Q6ZUF6 198 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
H3F3B-207ENST00000589417 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
H3F3B-207ENST00000589417 C9JCJ5 164 aa12.12□□□□□ -0.47
H3F3B-207ENST00000589417 GATA1P15976 413 aaPredicted RBP12.12□□□□□ -0.47
H3F3B-207ENST00000589417 S100A4P26447 101 aaKnown RBP12.12□□□□□ -0.47
H3F3B-207ENST00000589417 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
H3F3B-207ENST00000589417 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
H3F3B-207ENST00000589417 Q9H8V8 135 aa12.12□□□□□ -0.47
H3F3B-207ENST00000589417 SCRT2Q9NQ03 307 aa12.12□□□□□ -0.47
H3F3B-207ENST00000589417 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 NBDYA0A0U1RRE5 68 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 M0R2N4 97 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 PDE6DO43924 150 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 IFNA1P01562 189 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 CXCL1P09341 107 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
H3F3B-207ENST00000589417 LYPD6BQ8NI32 183 aa12.11□□□□□ -0.47
H3F3B-207ENST00000589417 K7EQD1 137 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 BCL2P10415 239 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 ZFP2Q6ZN57 461 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 SMIM12Q96EX1 92 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 VAX2Q9UIW0 290 aa12.1□□□□□ -0.47
H3F3B-207ENST00000589417 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 A8MWV9 139 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 RTL8CO15255 209 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 ARMS2P0C7Q2 107 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 LYPD5Q6UWN5 251 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 NHLRC2Q8NBF2 726 aa12.09□□□□□ -0.47
H3F3B-207ENST00000589417 M0R036 132 aa12.08□□□□□ -0.48
H3F3B-207ENST00000589417 GYPEP15421 78 aa12.08□□□□□ -0.48
H3F3B-207ENST00000589417 ALKAL2Q6UX46 152 aa12.08□□□□□ -0.48
H3F3B-207ENST00000589417 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
H3F3B-207ENST00000589417 DERL1Q9BUN8 251 aa12.08□□□□□ -0.48
H3F3B-207ENST00000589417 A0A1W2PPQ1 181 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
H3F3B-207ENST00000589417 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
H3F3B-207ENST00000589417 SRIP30626 198 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 NKX2-5P52952 324 aaPredicted RBP12.07□□□□□ -0.48
H3F3B-207ENST00000589417 TIRAPP58753 221 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 DMRTA1Q5VZB9 504 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
H3F3B-207ENST00000589417 GRIFINA4D1Z8 144 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 H3BVH4 76 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 IGLV2-8P01709 118 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 SOHLH1Q5JUK2 328 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 SLC25A29Q8N8R3 303 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 PCNPQ8WW12 178 aaKnown RBP12.06□□□□□ -0.48
H3F3B-207ENST00000589417 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
H3F3B-207ENST00000589417 PARLQ9H300 379 aa12.06□□□□□ -0.48
H3F3B-207ENST00000589417 RHOHQ15669 191 aa12.05□□□□□ -0.48
H3F3B-207ENST00000589417 CENPWQ5EE01 88 aa12.05□□□□□ -0.48
H3F3B-207ENST00000589417 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
H3F3B-207ENST00000589417 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
H3F3B-207ENST00000589417 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
H3F3B-207ENST00000589417 NDUFS6O75380 124 aaKnown RBP12.04□□□□□ -0.48
H3F3B-207ENST00000589417 SFRP2Q96HF1 295 aa12.04□□□□□ -0.48
H3F3B-207ENST00000589417 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
H3F3B-207ENST00000589417 PHLDA3Q9Y5J5 127 aa12.04□□□□□ -0.48
H3F3B-207ENST00000589417 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 A0A1B0GVY2 172 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 RHODO00212 210 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 SNAI2O43623 268 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 NXPH4O95158 308 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 OR5AL1P0C617 328 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 ZFP82Q8N141 532 aa12.03□□□□□ -0.48
H3F3B-207ENST00000589417 LOC100131303A0A0U1RQF7 123 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 SIVA1O15304 175 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 GNG4P50150 75 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
H3F3B-207ENST00000589417 Q6ZSN1 163 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 C6orf223Q8N319 242 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 JPT2Q9H910 190 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 BIN3Q9NQY0 253 aa12.02□□□□□ -0.49
H3F3B-207ENST00000589417 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 PRSS29PA6NIE9 313 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 K7EP13 123 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 CRYGDP07320 174 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 SAMD10Q9BYL1 202 aa12.01□□□□□ -0.49
H3F3B-207ENST00000589417 LINC00694P0DN24 101 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms