RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 GNG5P63218 68 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 WFDC2Q14508 124 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 SMUG1Q53HV7 270 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 SMIM3Q9BZL3 60 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 FGF8P55075 233 aaPredicted RBP9.23□□□□□ -0.93
VMP1-209ENST00000588915 RAB2AP61019 212 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 FLI1Q01543 452 aaPredicted RBP9.23□□□□□ -0.93
VMP1-209ENST00000588915 ZFP69Q49AA0 526 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 SERTAD4-AS1Q5TG53 156 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 Q8N976 141 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 RMI2Q96E14 147 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 MARVELD1Q9BSK0 173 aa9.23□□□□□ -0.93
VMP1-209ENST00000588915 UPK1BO75841 260 aa9.22□□□□□ -0.93
VMP1-209ENST00000588915 OR2G3Q8NGZ4 309 aa9.22□□□□□ -0.93
VMP1-209ENST00000588915 PARLQ9H300 379 aa9.22□□□□□ -0.93
VMP1-209ENST00000588915 WFDC1Q9HC57 220 aa9.22□□□□□ -0.93
VMP1-209ENST00000588915 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
VMP1-209ENST00000588915 IGLV2-11P01706 119 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 CDC34P49427 236 aaPredicted RBP9.21□□□□□ -0.94
VMP1-209ENST00000588915 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.94
VMP1-209ENST00000588915 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 LINC00479Q96M42 142 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.94
VMP1-209ENST00000588915 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 EPDR1Q9UM22 224 aa9.21□□□□□ -0.94
VMP1-209ENST00000588915 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 GAGE12JA6NER3 117 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 SSNA1O43805 119 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 OXTP01178 125 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 MBP02144 154 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
VMP1-209ENST00000588915 GAGE1Q13065 139 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 GAGE4Q13068 117 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 GAGE5Q13069 117 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 GAGE13Q4V321 117 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 Q8N3U1 123 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 BAALCQ8WXS3 180 aa9.2□□□□□ -0.94
VMP1-209ENST00000588915 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
VMP1-209ENST00000588915 RBFOX3A6NFN3 312 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 LECT2O14960 151 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 S100A4P26447 101 aaKnown RBP9.19□□□□□ -0.94
VMP1-209ENST00000588915 GCHFRP30047 84 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 SERF2P84101 59 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 LGALSLQ3ZCW2 172 aaPredicted RBP9.19□□□□□ -0.94
VMP1-209ENST00000588915 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 SCXQ7RTU7 201 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 PRNTQ86SH4 94 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 SYT8Q8NBV8 401 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
VMP1-209ENST00000588915 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 URGCP-MRPS24S4R325 110 aa9.19□□□□□ -0.94
VMP1-209ENST00000588915 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
VMP1-209ENST00000588915 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 RHODO00212 210 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 ASIPP42127 132 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 IFITM3Q01628 133 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 ELOBQ15370 118 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 DNLZQ5SXM8 178 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 NIT1Q86X76 327 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
VMP1-209ENST00000588915 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
VMP1-209ENST00000588915 CXorf1O96002 111 aa9.17□□□□□ -0.94
VMP1-209ENST00000588915 FAT3Q8TDW7 4589 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 ATRAIDQ6UW56 229 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 SAMD10Q9BYL1 202 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 Q9UF83 564 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 TNFSF18Q9UNG2 199 aa9.16□□□□□ -0.94
VMP1-209ENST00000588915 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 DEFA1P59665 94 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 DEFA3P59666 94 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
VMP1-209ENST00000588915 Q0VG73 95 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 C14orf177Q52M58 125 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 DMRTA1Q5VZB9 504 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 C14orf178Q8N769 122 aaPredicted RBP9.15□□□□□ -0.94
VMP1-209ENST00000588915 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 ACTR3CQ9C0K3 210 aaPredicted RBP9.15□□□□□ -0.94
VMP1-209ENST00000588915 KLK12Q9UKR0 248 aa9.15□□□□□ -0.94
VMP1-209ENST00000588915 A0A087WX48 190 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 IGLV2-8P01709 118 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 LINC01620Q4KN68 170 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 COX8CQ7Z4L0 72 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms