RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
RFX1-203ENST00000588520 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
RFX1-203ENST00000588520 NEGR1Q7Z3B1 354 aa11.88□□□□□ -0.51
RFX1-203ENST00000588520 A0A1B0GV50 99 aa11.87□□□□□ -0.51
RFX1-203ENST00000588520 RS1O15537 224 aa11.87□□□□□ -0.51
RFX1-203ENST00000588520 SRIP30626 198 aa11.87□□□□□ -0.51
RFX1-203ENST00000588520 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
RFX1-203ENST00000588520 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
RFX1-203ENST00000588520 SCO2A0A1W2PP80 73 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 A8MWV9 139 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 RTL8CO15255 209 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 SH2D1AO60880 128 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 IFNA1P01562 189 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
RFX1-203ENST00000588520 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
RFX1-203ENST00000588520 CRIP1P50238 77 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 C9orf62Q8N4C0 152 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 C11orf52Q96A22 123 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 DNAH17Q9UFH2 4485 aa11.86□□□□□ -0.51
RFX1-203ENST00000588520 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 K7EQD1 137 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 CFAP126Q5VTH2 177 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 MLST8Q9BVC4 326 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
RFX1-203ENST00000588520 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 PGPEP1LA6NFU8 196 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 CXCL1P09341 107 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
RFX1-203ENST00000588520 GYPEP15421 78 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 RHOHQ15669 191 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 C6orf223Q8N319 242 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 PRADC1Q9BSG0 188 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
RFX1-203ENST00000588520 HECTD4Q9Y4D8 3996 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 K7EP13 123 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 PDE6DO43924 150 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 TIRAPP58753 221 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 SMIM12Q96EX1 92 aa11.83□□□□□ -0.52
RFX1-203ENST00000588520 M0R036 132 aa11.82□□□□□ -0.52
RFX1-203ENST00000588520 SIVA1O15304 175 aa11.82□□□□□ -0.52
RFX1-203ENST00000588520 CCL20P78556 96 aa11.82□□□□□ -0.52
RFX1-203ENST00000588520 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
RFX1-203ENST00000588520 SCRT2Q9NQ03 307 aa11.82□□□□□ -0.52
RFX1-203ENST00000588520 H3BVH4 76 aa11.81□□□□□ -0.52
RFX1-203ENST00000588520 RHODO00212 210 aa11.81□□□□□ -0.52
RFX1-203ENST00000588520 ARMS2P0C7Q2 107 aa11.81□□□□□ -0.52
RFX1-203ENST00000588520 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
RFX1-203ENST00000588520 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
RFX1-203ENST00000588520 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 NXPH4O95158 308 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 BCL2P10415 239 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 SLC25A29Q8N8R3 303 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 PARLQ9H300 379 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
RFX1-203ENST00000588520 BLOC1S1P78537 153 aa11.79□□□□□ -0.52
RFX1-203ENST00000588520 ZFP82Q8N141 532 aa11.79□□□□□ -0.52
RFX1-203ENST00000588520 NHLRC2Q8NBF2 726 aa11.79□□□□□ -0.52
RFX1-203ENST00000588520 TRAV9-2A0A087WT02 112 aa11.78□□□□□ -0.52
RFX1-203ENST00000588520 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
RFX1-203ENST00000588520 BIN3Q9NQY0 253 aa11.78□□□□□ -0.52
RFX1-203ENST00000588520 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.53
RFX1-203ENST00000588520 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.53
RFX1-203ENST00000588520 GNG4P50150 75 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 CENPWQ5EE01 88 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 UFSP1Q6NVU6 142 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 SFRP2Q96HF1 295 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 DERL1Q9BUN8 251 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
RFX1-203ENST00000588520 TMSB15BA0A087X1C1 80 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 IGHV3-73A0A0B4J1V6 119 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 OR5AL1P0C617 328 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 PRR27Q6MZM9 219 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 LYPD6BQ8NI32 183 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 SSBP4Q9BWG4 385 aaPredicted RBP11.75□□□□□ -0.53
RFX1-203ENST00000588520 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
RFX1-203ENST00000588520 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 M0R381 172 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 SNAI2O43623 268 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 DNAH10OSP0CZ25 163 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 EVI2AP22794 236 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 RPS20P60866 119 aaKnown RBP11.74□□□□□ -0.53
RFX1-203ENST00000588520 ALKAL2Q6UX46 152 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
RFX1-203ENST00000588520 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
RFX1-203ENST00000588520 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
RFX1-203ENST00000588520 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
RFX1-203ENST00000588520 DNAH11Q96DT5 4516 aa11.72□□□□□ -0.53
RFX1-203ENST00000588520 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
RFX1-203ENST00000588520 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
RFX1-203ENST00000588520 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
RFX1-203ENST00000588520 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms