RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TRBV6-1A0A0K0K1D8 114 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 NDUFC2-KCTD14E9PQ53 114 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 H3BT86 120 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 J3QQQ9 107 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 LINC01620Q4KN68 170 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 PRIMA1Q86XR5 153 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 NABP1Q96AH0 204 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 SLC25A39Q9BZJ4 359 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-203ENST00000586134 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 NXT2Q9NPJ8 142 aaKnown RBP7.72□□□□□ -1.17
ZNF540-203ENST00000586134 PRO1854Q9UHT4 67 aa7.72□□□□□ -1.17
ZNF540-203ENST00000586134 ZNF785A8K8V0 405 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 LY6LH3BQJ8 138 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 HSPB6O14558 160 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.17
ZNF540-203ENST00000586134 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 COL8A2P25067 703 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 PSMB8P28062 276 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.17
ZNF540-203ENST00000586134 AAED1Q7RTV5 226 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 ZNF714Q96N38 554 aa7.71□□□□□ -1.17
ZNF540-203ENST00000586134 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 OXTP01178 125 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-203ENST00000586134 CD40P25942 277 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 BRWD1-AS2P59051 145 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 LINC00336Q6ZUF6 198 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 Q96MF0 132 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 SHANK2-AS3Q9BTD1 123 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 TLN2Q9Y4G6 2542 aa7.71□□□□□ -1.18
ZNF540-203ENST00000586134 ZFHX3Q15911 3703 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 CR1P17927 2039 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 FAM27BQ5VT28 67 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 C11orf71Q6IPW1 123 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 C5orf38Q86SI9 138 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 ARFGEF3Q5TH69 2177 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
ZNF540-203ENST00000586134 hADV29S1A0JD25 119 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 LEPP41159 167 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 ERVK-16P61578 105 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
ZNF540-203ENST00000586134 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-203ENST00000586134 ZNF497Q6ZNH5 498 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 TP53TG1Q9Y2A0 90 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 VPS13CQ709C8 3753 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 ABCA2Q9BZC7 2435 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 ZANQ9Y493 2812 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 DSCR9P59020 149 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 MDP1Q86V88 176 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 RNF152Q8N8N0 203 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 Q8N8P6 123 aa7.69□□□□□ -1.18
ZNF540-203ENST00000586134 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
ZNF540-203ENST00000586134 FN1P02751 2386 aaKnown RBP7.68□□□□□ -1.18
ZNF540-203ENST00000586134 IGHV3-9P01782 118 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 SLC25A16P16260 332 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 FXYD5Q96DB9 178 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 E7EQL1 145 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 INS-IGF2F8WCM5 200 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 IGLV1-44P01699 117 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 CFC1BP0CG36 223 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 CFC1P0CG37 223 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 CKS2P33552 79 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 CCL8P80075 99 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 MRPL51Q4U2R6 128 aaKnown RBP7.68□□□□□ -1.18
ZNF540-203ENST00000586134 EXOC3-AS1Q8N2X6 119 aa7.68□□□□□ -1.18
ZNF540-203ENST00000586134 H7C1H1 209 aa7.67□□□□□ -1.18
ZNF540-203ENST00000586134 M0R1B8 84 aa7.67□□□□□ -1.18
ZNF540-203ENST00000586134 LY6G6DO95868 133 aa7.67□□□□□ -1.18
ZNF540-203ENST00000586134 IGKV3-15P01624 115 aa7.67□□□□□ -1.18
ZNF540-203ENST00000586134 CRIP2P52943 208 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-203ENST00000586134 SRSF12Q8WXF0 261 aaKnown RBP7.67□□□□□ -1.18
ZNF540-203ENST00000586134 ABCA1O95477 2261 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 PGPA6NDG6 321 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 F8VRH5 84 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 IGHV4-39P01824 125 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 TCRAP04437 139 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 LOXL3P58215 753 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 FXYD7P58549 80 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 Q86TA4 180 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 METTL26Q96S19 204 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 DYSFO75923 2080 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 FAM236DA0A1B0GTK5 79 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 COX7A2P2O60397 106 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 FAM236CP0DP71 79 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 PRDX2P32119 198 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 HERVK_113P61574 105 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 C10orf113Q5VZT2 155 aa7.66□□□□□ -1.18
ZNF540-203ENST00000586134 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms