RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NDFIP1Q9BT67 221 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 MAP1LC3BQ9GZQ8 125 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
VAPA-209ENST00000585042 FBLL1A6NHQ2 334 aaKnown RBP10.12□□□□□ -0.79
VAPA-209ENST00000585042 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
VAPA-209ENST00000585042 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
VAPA-209ENST00000585042 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 GNRH2O43555 120 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 IFNA7P01567 189 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 TCRAP04437 139 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
VAPA-209ENST00000585042 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
VAPA-209ENST00000585042 Q5VSD8 79 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 FAM213BQ8TBF2 198 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
VAPA-209ENST00000585042 A0A1B0GVG6 124 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 GATA1P15976 413 aaPredicted RBP10.1□□□□□ -0.79
VAPA-209ENST00000585042 PPT1P50897 306 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 FGF8P55075 233 aaPredicted RBP10.1□□□□□ -0.79
VAPA-209ENST00000585042 GNG5P63218 68 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 LGALSLQ3ZCW2 172 aaPredicted RBP10.1□□□□□ -0.79
VAPA-209ENST00000585042 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 CYB561D1Q8N8Q1 229 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 SFT2D1Q8WV19 159 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 TREM1Q9NP99 234 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 EPDR1Q9UM22 224 aa10.1□□□□□ -0.79
VAPA-209ENST00000585042 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 F6UZH7 168 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 FAM229AH3BQW9 127 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 PSCAO43653 123 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 RAB5CP51148 216 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 UBE2G2P60604 165 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 ZFP69Q49AA0 526 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
VAPA-209ENST00000585042 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
VAPA-209ENST00000585042 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TRBV6-4A0A1B0GX49 114 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 LRCOL1A6NCL2 159 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TYMSP04818 313 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 HIST1H2BAQ96A08 127 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 PTH2Q96A98 100 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TVP23CQ96ET8 276 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TCEAL7Q9BRU2 100 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 PRADC1Q9BSG0 188 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 ARL2-SNX15V9GYD0 113 aa10.08□□□□□ -0.8
VAPA-209ENST00000585042 TRAV8-1A0A0A6YYK1 113 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 FAM74A7A6NL05 159 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 FHITP49789 147 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 FLI1Q01543 452 aaPredicted RBP10.07□□□□□ -0.8
VAPA-209ENST00000585042 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 PSG8Q9UQ74 426 aa10.07□□□□□ -0.8
VAPA-209ENST00000585042 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
VAPA-209ENST00000585042 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
VAPA-209ENST00000585042 RS1O15537 224 aa10.06□□□□□ -0.8
VAPA-209ENST00000585042 RHOHQ15669 191 aa10.06□□□□□ -0.8
VAPA-209ENST00000585042 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
VAPA-209ENST00000585042 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
VAPA-209ENST00000585042 PEX7O00628 323 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 LELP1Q5T871 98 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 CFAP126Q5VTH2 177 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 PRNTQ86SH4 94 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
VAPA-209ENST00000585042 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
VAPA-209ENST00000585042 MGST1P10620 155 aaKnown RBP10.04□□□□□ -0.8
VAPA-209ENST00000585042 UBE2G1P62253 170 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 LAGE3Q14657 143 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 Q8N814 137 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
VAPA-209ENST00000585042 A0A1B0GV50 99 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 PAGE4O60829 102 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 HERC1Q15751 4861 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 FMC1Q96HJ9 113 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 C9orf85Q96MD7 179 aa10.03□□□□□ -0.8
VAPA-209ENST00000585042 GCGP01275 180 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 IGLV2-11P01706 119 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 S100A9P06702 114 aaKnown RBP10.02□□□□□ -0.81
VAPA-209ENST00000585042 SULT1A2P50226 295 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 Q6ZSN1 163 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 ATP6V0E2Q8NHE4 81 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 ZFP30Q9Y2G7 519 aa10.02□□□□□ -0.81
VAPA-209ENST00000585042 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
VAPA-209ENST00000585042 TRAV34A0A0B4J273 112 aa10.01□□□□□ -0.81
VAPA-209ENST00000585042 AKR1C3P42330 323 aa10.01□□□□□ -0.81
VAPA-209ENST00000585042 ZFP2Q6ZN57 461 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms