RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CSTL1Q9H114 145 aa8.62□□□□□ -1.03
TOP3A-217ENST00000584582 PPBPP02775 128 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 PRR9Q5T870 116 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 SMPXQ9UHP9 88 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 TRAV8-2A0A0B4J237 113 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 C16orf54Q6UWD8 224 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 H3BUT2 72 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-217ENST00000584582 PIFOQ8TCI5 191 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 LINC01587Q99440 93 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
TOP3A-217ENST00000584582 H7C2G1 150 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 LAGE3Q14657 143 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 TMEM8BA6NDV4 472 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 A6NDX4 124 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.033e-7■■■□□ 17.9
TOP3A-217ENST00000584582 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 A0A087WW49 117 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 IGKV3OR2-268A0A0C4DH90 116 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 IGHV3-53P01767 116 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 NSUN5P1Q3KNT7 163 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
TOP3A-217ENST00000584582 XCL2Q9UBD3 114 aa8.6□□□□□ -1.03
TOP3A-217ENST00000584582 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
TOP3A-217ENST00000584582 FBN2P35556 2912 aa8.59□□□□□ -1.03
TOP3A-217ENST00000584582 DGAT2L7PQ6IED9 249 aa8.59□□□□□ -1.03
TOP3A-217ENST00000584582 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.03
TOP3A-217ENST00000584582 IGKCP01834 107 aa8.59□□□□□ -1.03
TOP3A-217ENST00000584582 DSCR9P59020 149 aa8.59□□□□□ -1.03
TOP3A-217ENST00000584582 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
TOP3A-217ENST00000584582 Q8N976 141 aa8.59□□□□□ -1.03
TOP3A-217ENST00000584582 ATRQ13535 2644 aa8.59□□□□□ -1.04
TOP3A-217ENST00000584582 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
TOP3A-217ENST00000584582 ITPR2Q14571 2701 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 IGHG4P01861 327 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 DPM2O94777 84 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 ATP5LO75964 103 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 ZNF48Q96MX3 618 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-217ENST00000584582 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
TOP3A-217ENST00000584582 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
TOP3A-217ENST00000584582 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
TOP3A-217ENST00000584582 A6NDN8 102 aa8.57□□□□□ -1.04
TOP3A-217ENST00000584582 RNASE13Q5GAN3 156 aaKnown RBP8.57□□□□□ -1.04
TOP3A-217ENST00000584582 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
TOP3A-217ENST00000584582 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-217ENST00000584582 BSNQ9UPA5 3926 aa8.57□□□□□ -1.04
TOP3A-217ENST00000584582 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
TOP3A-217ENST00000584582 MDFICQ9P1T7 246 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 K7EP13 123 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 PRSS2P07478 247 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 MEGF9Q9H1U4 602 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 RAX2Q96IS3 184 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
TOP3A-217ENST00000584582 APOMO95445 188 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 IGLC6P0CF74 106 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
TOP3A-217ENST00000584582 CTRLP40313 264 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
TOP3A-217ENST00000584582 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 GATA3P23771 443 aa8.55□□□□□ -1.04
TOP3A-217ENST00000584582 CFHR3Q02985 330 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 C9orf47Q6ZRZ4 202 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 K7ERJ3 54 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
TOP3A-217ENST00000584582 Q1RN00 199 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 Q8N8P6 123 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
TOP3A-217ENST00000584582 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
TOP3A-217ENST00000584582 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 SAP30O75446 220 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 CD5LO43866 347 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 CDKN1BP46527 198 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 COTL1Q14019 142 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 ZFAND2AQ8N6M9 145 aa8.53□□□□□ -1.04
TOP3A-217ENST00000584582 TNFRSF18Q9Y5U5 241 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms