RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 LYPD6BQ8NI32 183 aa8.31□□□□□ -1.08
TOP3A-215ENST00000583328 PRO0255Q9UI72 69 aa8.31□□□□□ -1.08
TOP3A-215ENST00000583328 C7orf71A4D174 169 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 K7EP13 123 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 GPX1P07203 203 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 BCL2P10415 239 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 FLI1Q01543 452 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-215ENST00000583328 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 C11orf72Q8NBR9 251 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-215ENST00000583328 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 PSG8Q9UQ74 426 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 HHLA3Q9XRX5 114 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
TOP3A-215ENST00000583328 PSCAO43653 123 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 SPINK4O60575 86 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 AKR1C3P42330 323 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 CRYBA4P53673 196 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
TOP3A-215ENST00000583328 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 EIF4E3Q8N5X7 224 aaKnown RBP8.29□□□□□ -1.08
TOP3A-215ENST00000583328 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 SGK494Q96LW2 274 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 C8orf49Q96NF6 230 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 TREM1Q9NP99 234 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 VAX2Q9UIW0 290 aa8.29□□□□□ -1.08
TOP3A-215ENST00000583328 TRAV34A0A0B4J273 112 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 TRBV6-1A0A0K0K1D8 114 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
TOP3A-215ENST00000583328 RNASE4P34096 147 aaKnown RBP8.28□□□□□ -1.08
TOP3A-215ENST00000583328 UBE2G1P62253 170 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 BTN1A1Q13410 526 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 ANXA2RQ3ZCQ2 193 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 PRR9Q5T870 116 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 PRNTQ86SH4 94 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 Q86TA4 180 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 TVP23CQ96ET8 276 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 FMC1Q96HJ9 113 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 LINC00479Q96M42 142 aa8.28□□□□□ -1.08
TOP3A-215ENST00000583328 PDE6DO43924 150 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 CRYGDP07320 174 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 SRIP30626 198 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 TCL1AP56279 114 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 TMEM183BQ1AE95 376 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 Q6AWC8 147 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
TOP3A-215ENST00000583328 MRPL16Q9NX20 251 aaKnown RBP8.27□□□□□ -1.09
TOP3A-215ENST00000583328 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 RBFOX3A6NFN3 312 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 FHL2Q14192 279 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 SMUG1Q53HV7 270 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 ZNF506Q5JVG8 444 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 PCNPQ8WW12 178 aaKnown RBP8.26□□□□□ -1.09
TOP3A-215ENST00000583328 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
TOP3A-215ENST00000583328 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 K7EQD1 137 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 RGS13O14921 159 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 LTAP01374 205 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 TOR2AQ5JU69 321 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 IBA57Q5T440 356 aaKnown RBP8.25□□□□□ -1.09
TOP3A-215ENST00000583328 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 Q8N814 137 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 DNAH8Q96JB1 4490 aa8.25□□□□□ -1.09
TOP3A-215ENST00000583328 TRAV21A0A0B4J279 112 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 NDUFS6O75380 124 aaKnown RBP8.24□□□□□ -1.09
TOP3A-215ENST00000583328 GCGP01275 180 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 GYPEP15421 78 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
TOP3A-215ENST00000583328 RAB14P61106 215 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 ZNF415Q09FC8 603 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 EIF5A2Q9GZV4 153 aaKnown RBP8.24□□□□□ -1.09
TOP3A-215ENST00000583328 MED9Q9NWA0 146 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 TP53TG3Q9ULZ0 132 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
TOP3A-215ENST00000583328 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 TMEM250H0YL14 139 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 PFN1P07737 140 aaKnown RBP8.23□□□□□ -1.09
TOP3A-215ENST00000583328 ZNF80P51504 273 aaPredicted RBP8.23□□□□□ -1.09
TOP3A-215ENST00000583328 IFITM2Q01629 132 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 Q6ZQT7 251 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 TMEM183AQ8IXX5 376 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
TOP3A-215ENST00000583328 ORM1P02763 201 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 SFTA3P0C7M3 94 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 TDRG1Q3Y452 100 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
TOP3A-215ENST00000583328 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.09
TOP3A-215ENST00000583328 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.1
TOP3A-215ENST00000583328 FABP5P3A8MUU1 101 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms