RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CFAP126Q5VTH2 177 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 NHLRC2Q8NBF2 726 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 TCEAL7Q9BRU2 100 aa11.42□□□□□ -0.58
SREBF1-219ENST00000580540 hCG_2014768A0A024R1R8 64 aa11.41□□□□□ -0.58
SREBF1-219ENST00000580540 GRIFINA4D1Z8 144 aa11.41□□□□□ -0.58
SREBF1-219ENST00000580540 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-219ENST00000580540 FAM162BQ5T6X4 162 aa11.41□□□□□ -0.58
SREBF1-219ENST00000580540 Q6ZNX1 250 aa11.41□□□□□ -0.58
SREBF1-219ENST00000580540 TCTE3Q8IZS6 198 aa11.41□□□□□ -0.58
SREBF1-219ENST00000580540 PKD1P98161 4303 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 SCO2A0A1W2PP80 73 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 A0A1W2PPQ1 181 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 H3BVH4 76 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 LTAP01374 205 aa11.4□□□□□ -0.58
SREBF1-219ENST00000580540 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
SREBF1-219ENST00000580540 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
SREBF1-219ENST00000580540 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
SREBF1-219ENST00000580540 KRBOX1C9JBD0 128 aa11.39□□□□□ -0.59
SREBF1-219ENST00000580540 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
SREBF1-219ENST00000580540 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
SREBF1-219ENST00000580540 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
SREBF1-219ENST00000580540 S100A9P06702 114 aaKnown RBP11.38□□□□□ -0.59
SREBF1-219ENST00000580540 CCL20P78556 96 aa11.38□□□□□ -0.59
SREBF1-219ENST00000580540 PTH2Q96A98 100 aa11.38□□□□□ -0.59
SREBF1-219ENST00000580540 GNG13Q9P2W3 67 aa11.38□□□□□ -0.59
SREBF1-219ENST00000580540 CIDEAO60543 219 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 C1QBP02746 253 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 ARMS2P0C7Q2 107 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 RAB5CP51148 216 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 ZNF674Q2M3X9 581 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 BAGE2Q86Y30 109 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 IL36BQ9NZH7 164 aa11.37□□□□□ -0.59
SREBF1-219ENST00000580540 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 A8MWV9 139 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 TEX46H3BTG2 121 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 LINC00315P59091 139 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 RHOHQ15669 191 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 AKAP14Q86UN6 197 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 JPT2Q9H910 190 aa11.36□□□□□ -0.59
SREBF1-219ENST00000580540 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 SULT1A2P50226 295 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 PARLQ9H300 379 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 MANBALQ9NQG1 85 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 LY96Q9Y6Y9 160 aa11.35□□□□□ -0.59
SREBF1-219ENST00000580540 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
SREBF1-219ENST00000580540 MGST1P10620 155 aaKnown RBP11.34□□□□□ -0.59
SREBF1-219ENST00000580540 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
SREBF1-219ENST00000580540 PRR27Q6MZM9 219 aa11.34□□□□□ -0.59
SREBF1-219ENST00000580540 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
SREBF1-219ENST00000580540 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 M0R381 172 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 EVI2AP22794 236 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
SREBF1-219ENST00000580540 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 FAM74A4Q5TZK3 123 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 Q6ZSN1 163 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 KIAA1109Q2LD37 5005 aa11.33□□□□□ -0.6
SREBF1-219ENST00000580540 HERC2O95714 4834 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 GAGE12JA6NER3 117 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
SREBF1-219ENST00000580540 RPL35P42766 123 aaKnown RBP11.32□□□□□ -0.6
SREBF1-219ENST00000580540 GAGE1Q13065 139 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 GAGE4Q13068 117 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 GAGE5Q13069 117 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 GAGE13Q4V321 117 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 OR10J3Q5JRS4 329 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 ZFP2Q6ZN57 461 aa11.32□□□□□ -0.6
SREBF1-219ENST00000580540 A0A087WWL8 130 aa11.31□□□□□ -0.6
SREBF1-219ENST00000580540 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
SREBF1-219ENST00000580540 C16orf90A8MZG2 172 aa11.31□□□□□ -0.6
SREBF1-219ENST00000580540 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
SREBF1-219ENST00000580540 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
SREBF1-219ENST00000580540 IFNA1P01562 189 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 CRYGDP07320 174 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 TIRAPP58753 221 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 SPATA12Q7Z6I5 190 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-219ENST00000580540 MLST8Q9BVC4 326 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
SREBF1-219ENST00000580540 RHODO00212 210 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 DNAH10OSP0CZ25 163 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 SFRP2Q96HF1 295 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
SREBF1-219ENST00000580540 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms