RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CD7P09564 240 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 MED14OSP0DP75 135 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 CACNG7P62955 275 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 IGHV4-4A0A075B6R2 117 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 M0R381 172 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 TDRG1Q3Y452 100 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 URB1-AS1Q96HZ7 61 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SMKR1H3BMG3 65 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 NCR2O95944 276 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SMIM6P0DI80 62 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 EVI2AP22794 236 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 C12orf57Q99622 126 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 PHLDA3Q9Y5J5 127 aa10.91□□□□□ -0.66
CDK5RAP3-218ENST00000580391 PYY3Q5JQD4 70 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RAB4AP20338 218 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 PMCHP20382 165 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 STHQ8IWL8 128 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 Q8N1Y9 231 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SAMD10Q9BYL1 202 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 U3KQK5 164 aa10.9□□□□□ -0.66
CDK5RAP3-218ENST00000580391 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 IGHV3-16A0A0C4DH30 117 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 ORMDL3Q8N138 153 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
CDK5RAP3-218ENST00000580391 GAS8-AS1O95177 125 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 AMTP48728 403 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 FAM19A2Q8N3H0 131 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 C19orf73Q9NVV2 129 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 MDFICQ9P1T7 246 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 NXPH4O95158 308 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CKS2P33552 79 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 NIT1Q86X76 327 aa10.88□□□□□ -0.67
CDK5RAP3-218ENST00000580391 NPYP01303 97 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 S100A12P80511 92 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 SMIM15Q7Z3B0 74 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CLUHP3Q96NS8 147 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 TRRAPQ9Y4A5 3859 aa10.87□□□□□ -0.67
CDK5RAP3-218ENST00000580391 HSBP1O75506 76 aa10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 TRAV26-2A0A0B4J265 109 aa10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 PRM2P04554 102 aa10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 GATA1P15976 413 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 Q6ZWC4 215 aa10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CBY3A6NI87 242 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 INSP01308 110 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 HTN1P15515 57 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 C14orf178Q8N769 122 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 AP1S3Q96PC3 154 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 FAM110AQ9BQ89 295 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 TRGV11A0A075B6L2 103 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 LOC389332A0A1B0GUA5 103 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CMC4P56277 68 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 PMCHL1Q16048 86 aa10.85□□□□□ -0.67
CDK5RAP3-218ENST00000580391 FBN1P35555 2871 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-218ENST00000580391 LINC00614P0C842 121 aa10.84□□□□□ -0.67
CDK5RAP3-218ENST00000580391 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-218ENST00000580391 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
CDK5RAP3-218ENST00000580391 JPT2Q9H910 190 aa10.84□□□□□ -0.67
CDK5RAP3-218ENST00000580391 PPBPP02775 128 aa10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 JOSD1Q15040 202 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 MGPP08493 103 aa10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
CDK5RAP3-218ENST00000580391 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 INSL3P51460 131 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 LINC01587Q99440 93 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 NIT2Q9NQR4 276 aa10.82□□□□□ -0.68
CDK5RAP3-218ENST00000580391 BTF3P20290 206 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 NRACQ8N912 160 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 KIF25-AS1Q9Y6Z4 181 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
CDK5RAP3-218ENST00000580391 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 A0A087WWL8 130 aa10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 LINC00315P59091 139 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms