RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 IGKV3D-20A0A0C4DH25 116 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 KRBOX1C9JBD0 128 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 CEBPGP53567 150 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 PNRC1Q12796 327 aaPredicted RBP5.14□□□□□ -1.59
RNF43-204ENST00000580014 DEFB121Q5J5C9 76 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 NHLRC2Q8NBF2 726 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 ISOC2Q96AB3 205 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 OSTCQ9NRP0 149 aa5.14□□□□□ -1.59
RNF43-204ENST00000580014 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 PLAC8L1A1L4L8 177 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 USP17L23D6RBM5 183 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 F8W036 122 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 FOXA3P55318 350 aaPredicted RBP5.13□□□□□ -1.59
RNF43-204ENST00000580014 OR5I1Q13606 314 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 DEFB135Q30KP9 77 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 IBA57Q5T440 356 aaKnown RBP5.13□□□□□ -1.59
RNF43-204ENST00000580014 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 PTH2Q96A98 100 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 KCNS1Q96KK3 526 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 RCHY1Q96PM5 261 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 LINC01587Q99440 93 aa5.13□□□□□ -1.59
RNF43-204ENST00000580014 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 B4DEV8 164 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 MGST1P10620 155 aaKnown RBP5.12□□□□□ -1.59
RNF43-204ENST00000580014 MIFP14174 115 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 AZU1P20160 251 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 RPS20P60866 119 aaKnown RBP5.12□□□□□ -1.59
RNF43-204ENST00000580014 FAM159AQ6UWV7 190 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 Q8NAQ8 132 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 RNASE8Q8TDE3 154 aaKnown RBP5.12□□□□□ -1.59
RNF43-204ENST00000580014 SFRP2Q96HF1 295 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 SCRT2Q9NQ03 307 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 V9GYV3 84 aa5.12□□□□□ -1.59
RNF43-204ENST00000580014 IGHV3-16A0A0C4DH30 117 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 TMEM189A5PLL7 270 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 ZNF705GA8MUZ8 300 aaPredicted RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 GNRH2O43555 120 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 NUDT3O95989 172 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 P01737 135 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 ORM1P02763 201 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 TYMSP04818 313 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 OR5AL1P0C617 328 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 IGLC6P0CF74 106 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 RNASE3P12724 160 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 ADIRFQ15847 76 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 PIK3CD-AS1Q5SR53 167 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 MUC21Q5SSG8 566 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 PRR27Q6MZM9 219 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 LINC00612Q8N6U2 182 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 OR10G8Q8NGN5 311 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 OR11H2Q8NH07 326 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 C9orf85Q96MD7 179 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 GFRA4Q9GZZ7 299 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 RNASE7Q9H1E1 156 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 C11orf68Q9H3H3 251 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 RPP21Q9H633 154 aaKnown RBP5.11□□□□□ -1.59
RNF43-204ENST00000580014 COX11Q9Y6N1 276 aa5.11□□□□□ -1.59
RNF43-204ENST00000580014 FBN3Q75N90 2809 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 A0A087WWC5 75 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 IGHV4-28A0A0C4DH34 117 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 A8MWL6 223 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 PPP1R2P9O14990 202 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 SNAI2O43623 268 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 GATCO43716 136 aaKnown RBP5.1□□□□□ -1.59
RNF43-204ENST00000580014 PRM2P04554 102 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 TCL1AP56279 114 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 ERVFC1-1P60608 527 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 RPL19P84098 196 aaKnown RBP5.1□□□□□ -1.59
RNF43-204ENST00000580014 WDR73Q6P4I2 378 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 C15orf54Q8N8G6 183 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 OR2D3Q8NGH3 330 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 TSKUQ8WUA8 353 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 SPXQ9BT56 116 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 TMEM208Q9BTX3 173 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 NDUFAF3Q9BU61 184 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 CNFNQ9BYD5 112 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 RETNQ9HD89 108 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 TMEM242Q9NWH2 141 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 IL36BQ9NZH7 164 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 MDFICQ9P1T7 246 aa5.1□□□□□ -1.59
RNF43-204ENST00000580014 IGHV4-4A0A075B6R2 117 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 IGHV3OR16-12A0A075B7B8 117 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 A0A1W2PPQ1 181 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 SMIM27A0A1W2PRY6 76 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 XKRY2A2RUG3 117 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 M0R036 132 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 SPINK4O60575 86 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 NXPH4O95158 308 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 MT-ND4LP03901 98 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 SLPIP03973 132 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 ASIPP42127 132 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 RHEBQ15382 184 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 LGALS9BQ3B8N2 356 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 RNF212Q495C1 297 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 SVBPQ8N300 66 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms