RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 PIK3CD-AS1Q5SR53 167 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 IL36BQ9NZH7 164 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
MKS1-207ENST00000578789 IGLV2-18A0A075B6J9 118 aa10□□□□□ -0.81
MKS1-207ENST00000578789 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
MKS1-207ENST00000578789 C9JCJ5 164 aa10□□□□□ -0.81
MKS1-207ENST00000578789 RS1O15537 224 aa10□□□□□ -0.81
MKS1-207ENST00000578789 CIDEAO60543 219 aa10□□□□□ -0.81
MKS1-207ENST00000578789 BCL2P10415 239 aa10□□□□□ -0.81
MKS1-207ENST00000578789 S100A4P26447 101 aaKnown RBP10□□□□□ -0.81
MKS1-207ENST00000578789 RPL35P42766 123 aaKnown RBP10□□□□□ -0.81
MKS1-207ENST00000578789 ESRGQ1W209 222 aa10□□□□□ -0.81
MKS1-207ENST00000578789 ALKAL2Q6UX46 152 aa10□□□□□ -0.81
MKS1-207ENST00000578789 BAGE2Q86Y30 109 aa10□□□□□ -0.81
MKS1-207ENST00000578789 NHLRC2Q8NBF2 726 aa10□□□□□ -0.81
MKS1-207ENST00000578789 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
MKS1-207ENST00000578789 M0R036 132 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 PDE6DO43924 150 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
MKS1-207ENST00000578789 CFAP126Q5VTH2 177 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 ZNF575Q86XF7 245 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 DERL1Q9BUN8 251 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
MKS1-207ENST00000578789 H3BVH4 76 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 M0R2N4 97 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 CXCL1P09341 107 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
MKS1-207ENST00000578789 BLOC1S1P78537 153 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
MKS1-207ENST00000578789 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 VAX2Q9UIW0 290 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
MKS1-207ENST00000578789 K7EQD1 137 aa9.97□□□□□ -0.81
MKS1-207ENST00000578789 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
MKS1-207ENST00000578789 LYPD6BQ8NI32 183 aa9.97□□□□□ -0.81
MKS1-207ENST00000578789 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
MKS1-207ENST00000578789 DNAH2Q9P225 4427 aa9.97□□□□□ -0.81
MKS1-207ENST00000578789 NBDYA0A0U1RRE5 68 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 GRIFINA4D1Z8 144 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 A8MWV9 139 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 IGLV2-8P01709 118 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 ARMS2P0C7Q2 107 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 GYPEP15421 78 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 LINC00336Q6ZUF6 198 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 PCNPQ8WW12 178 aaKnown RBP9.96□□□□□ -0.82
MKS1-207ENST00000578789 PARLQ9H300 379 aa9.96□□□□□ -0.82
MKS1-207ENST00000578789 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 TRBV6-4A0A1B0GX49 114 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 RTL8CO15255 209 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 SRIP30626 198 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 SYT8Q8NBV8 401 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 Q9H8V8 135 aa9.95□□□□□ -0.82
MKS1-207ENST00000578789 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 MGST1P10620 155 aaKnown RBP9.94□□□□□ -0.82
MKS1-207ENST00000578789 RHOHQ15669 191 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 PRR27Q6MZM9 219 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 SLC25A29Q8N8R3 303 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
MKS1-207ENST00000578789 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 GNG4P50150 75 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 RPL19P84098 196 aaKnown RBP9.93□□□□□ -0.82
MKS1-207ENST00000578789 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 PHLDA3Q9Y5J5 127 aa9.93□□□□□ -0.82
MKS1-207ENST00000578789 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 RHODO00212 210 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 SNAI2O43623 268 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 NXPH4O95158 308 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 C1orf134Q5TEV5 83 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 SFRP2Q96HF1 295 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
MKS1-207ENST00000578789 FAT2Q9NYQ8 4349 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 RBFOX3A6NFN3 312 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 OR5AL1P0C617 328 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 TIRAPP58753 221 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 SSBP4Q9BWG4 385 aaPredicted RBP9.91□□□□□ -0.82
MKS1-207ENST00000578789 SAMD10Q9BYL1 202 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 JPT2Q9H910 190 aa9.91□□□□□ -0.82
MKS1-207ENST00000578789 M0R381 172 aa9.9□□□□□ -0.82
MKS1-207ENST00000578789 SIVA1O15304 175 aa9.9□□□□□ -0.82
MKS1-207ENST00000578789 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
MKS1-207ENST00000578789 Q6ZSN1 163 aa9.9□□□□□ -0.82
MKS1-207ENST00000578789 BIN3Q9NQY0 253 aa9.9□□□□□ -0.82
MKS1-207ENST00000578789 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.82
MKS1-207ENST00000578789 PRSS29PA6NIE9 313 aa9.89□□□□□ -0.83
MKS1-207ENST00000578789 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms