RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	hCG_2014768	A0A024R1R8	64 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	ORM1	P02763	201 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	SOHLH1	Q5JUK2	328 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	C1orf134	Q5TEV5	83 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	TXNDC17	Q9BRA2	123 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	IL36B	Q9NZH7	164 aa		9.41	□□□□□ -0.9
CSNK1D-208	ENST00000578501	SCO2	A0A1W2PP80	73 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501		B4DEV8	164 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	KRBOX1	C9JBD0	128 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501		C9JCJ5	164 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501		K7EQD1	137 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	RS1	O15537	224 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	SH2D1A	O60880	128 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	S100A4	P26447	101 aa	Known RBP	9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	ASIP	P42127	132 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	CCL20	P78556	96 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	CFAP126	Q5VTH2	177 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	NEGR1	Q7Z3B1	354 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	C9orf62	Q8N4C0	152 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	KRTAP4-5	Q9BYR2	181 aa		9.4	□□□□□ -0.9
CSNK1D-208	ENST00000578501	PGPEP1L	A6NFU8	196 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	GYPE	P15421	78 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	GATA1	P15976	413 aa	Predicted RBP	9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	LINC01559	Q495D7	138 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	ZNF506	Q5JVG8	444 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	PCNP	Q8WW12	178 aa	Known RBP	9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	C11orf52	Q96A22	123 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	MLST8	Q9BVC4	326 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501	GNG13	Q9P2W3	67 aa		9.39	□□□□□ -0.91
CSNK1D-208	ENST00000578501		A0A1W2PPQ1	181 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	BTF3	P20290	206 aa	Known RBP	9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	TTC32	Q5I0X7	151 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	LYPD5	Q6UWN5	251 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SH2D6	Q7Z4S9	175 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	ZNF575	Q86XF7	245 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	BAGE2	Q86Y30	109 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	FAT2	Q9NYQ8	4349 aa		9.38	□□□□□ -0.91
CSNK1D-208	ENST00000578501	DNAH17	Q9UFH2	4485 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501	TRBV6-4	A0A1B0GX49	114 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501		A8MWV9	139 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501		M0R036	132 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SRI	P30626	198 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SCRT2	Q9NQ03	307 aa		9.37	□□□□□ -0.91
CSNK1D-208	ENST00000578501	ARMS2	P0C7Q2	107 aa		9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	MGST1	P10620	155 aa	Known RBP	9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	RPL35	P42766	123 aa	Known RBP	9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	MEF2B	Q02080	365 aa	Predicted RBP	9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	ZFP2	Q6ZN57	461 aa		9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	C6orf223	Q8N319	242 aa		9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SLC25A29	Q8N8R3	303 aa		9.36	□□□□□ -0.91
CSNK1D-208	ENST00000578501		H3BVH4	76 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SIVA1	O15304	175 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	PDE6D	O43924	150 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	NXPH4	O95158	308 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	IFNA1	P01562	189 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	CXCL1	P09341	107 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	TAGLN2	P37802	199 aa	Known RBP	9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	TIRAP	P58753	221 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	RHOH	Q15669	191 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	NHLRC2	Q8NBF2	726 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SYT8	Q8NBV8	401 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	PRADC1	Q9BSG0	188 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	PARL	Q9H300	379 aa		9.35	□□□□□ -0.91
CSNK1D-208	ENST00000578501	GRIFIN	A4D1Z8	144 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	BCL2	P10415	239 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	DMRTA1	Q5VZB9	504 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	SMIM12	Q96EX1	92 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	KRTAP1-5	Q9BYS1	174 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	VAX2	Q9UIW0	290 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	PHLDA3	Q9Y5J5	127 aa		9.34	□□□□□ -0.91
CSNK1D-208	ENST00000578501	IGHV3-73	A0A0B4J1V6	119 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501	LOC100131303	A0A0U1RQF7	123 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501		A0A1B0GVG6	124 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501		K7EP13	123 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501	UFSP1	Q6NVU6	142 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501	DERL1	Q9BUN8	251 aa		9.33	□□□□□ -0.92
CSNK1D-208	ENST00000578501	TMSB15B	A0A087X1C1	80 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	RHOD	O00212	210 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	BLOC1S1	P78537	153 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	CENPW	Q5EE01	88 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	ZFP82	Q8N141	532 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	SFRP2	Q96HF1	295 aa		9.32	□□□□□ -0.92
CSNK1D-208	ENST00000578501	ABCA13	Q86UQ4	5058 aa		9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	ALKAL2	Q6UX46	152 aa		9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	LYPD6B	Q8NI32	183 aa		9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	SSBP4	Q9BWG4	385 aa	Predicted RBP	9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	SAMD10	Q9BYL1	202 aa		9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	BOLA1	Q9Y3E2	137 aa		9.31	□□□□□ -0.92
CSNK1D-208	ENST00000578501	TRAV9-2	A0A087WT02	112 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	SNAI2	O43623	268 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	CDK2AP2	O75956	126 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	IGLV2-8	P01709	118 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	OR5AL1	P0C617	328 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	GNG4	P50150	75 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	PRR27	Q6MZM9	219 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501		Q6ZSN1	163 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	MAPKAPK5-AS1	Q8N8E1	139 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	JPT2	Q9H910	190 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	MED9	Q9NWA0	146 aa		9.3	□□□□□ -0.92
CSNK1D-208	ENST00000578501	PKHD1	P08F94	4074 aa		9.29	□□□□□ -0.92

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