RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001		U3KQK5	164 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	HSD52	Q0P140	79 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	WFDC2	Q14508	124 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	DPF1	Q92782	380 aa		11.24	□□□□□ -0.61
PRPF8-216	ENST00000577001	KNCN	A6PVL3	124 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	PRB1	P04280	392 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	SCGB1D4	Q6XE38	83 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	OR10J6P	Q8NGY7	276 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	NBEAL2	Q6ZNJ1	2754 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001		A0A1B0GW15	77 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	DUSP14	O95147	198 aa	Known RBP	11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	CD7	P09564	240 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	KHDC1L	Q5JSQ8	128 aa		11.23	□□□□□ -0.61
PRPF8-216	ENST00000577001	PRSS29P	A6NIE9	313 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	FABP2	P12104	132 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	RPS20	P60866	119 aa	Known RBP	11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	GTSF1L	Q9H1H1	148 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	HIVEP2	P31629	2446 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	TEX48	A0A1B0GUV7	120 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	HLA-DRB4	P13762	266 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	DEFB136	Q30KP8	78 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	CSTL1	Q9H114	145 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	HLA-DRB4	X5D2U9	266 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	MINOS1	Q5TGZ0	78 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	NRAC	Q8N912	160 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	MINOS1-NBL1	R4GNA1	71 aa		11.22	□□□□□ -0.61
PRPF8-216	ENST00000577001	LOC107984156	A0A0G2JMH3	177 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001		A0A1W2PPM0	123 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	ADARB2-AS1	A8MUL3	147 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	ETDB	Q3ZM63	59 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	PSMG4	Q5JS54	123 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	GPHB5	Q86YW7	130 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	ARL17A	Q8IVW1	177 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	GATD1	Q8NB37	220 aa		11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	SRSF8	Q9BRL6	282 aa	Known RBP	11.21	□□□□□ -0.61
PRPF8-216	ENST00000577001	CDKN1B	P46527	198 aa		11.21	□□□□□ -0.62
PRPF8-216	ENST00000577001	GTF2H5	Q6ZYL4	71 aa		11.21	□□□□□ -0.62
PRPF8-216	ENST00000577001	NXT2	Q9NPJ8	142 aa	Known RBP	11.21	□□□□□ -0.62
PRPF8-216	ENST00000577001	INSL3	P51460	131 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	LINC01559	Q495D7	138 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	PLEKHB2	Q96CS7	222 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	SLC25A16	P16260	332 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	SEC11A	P67812	179 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	PAX2	Q02962	417 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	SPINK13	Q1W4C9	94 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001		Q8N8P6	123 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	PIFO	Q8TCI5	191 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	RASL10A	Q92737	203 aa		11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZNF418	Q8TF45	676 aa	Predicted RBP	11.2	□□□□□ -0.62
PRPF8-216	ENST00000577001	NPC2	P61916	151 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	TMEM170B	Q5T4T1	132 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	C2orf66	Q6UXQ4	117 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	SLC50A1	Q9BRV3	221 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	NPFFR1	Q9GZQ6	430 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	TRBV6-1	A0A0K0K1D8	114 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001		H3BRM9	83 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001		K7ERU9	68 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	IGHV4-59	P01825	116 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	COTL1	Q14019	142 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001		K7EP34	96 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001	MDFIC	Q9P1T7	246 aa		11.19	□□□□□ -0.62
PRPF8-216	ENST00000577001		P0DMU3	169 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	FAM231A	P0DMU4	169 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	FAM231C	P0DMU5	169 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	ASIP	P42127	132 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	SUMO2	P61956	95 aa	Known RBP	11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	SMAGP	Q0VAQ4	97 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZFAND2A	Q8N6M9	145 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.18	□□□□□ -0.62	2e-8	■□□□□ 8.8
PRPF8-216	ENST00000577001	PTH2	Q96A98	100 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	CCL19	Q99731	98 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	MOB4	Q9Y3A3	225 aa		11.18	□□□□□ -0.62
PRPF8-216	ENST00000577001	FBXL19-AS1	Q494R0	122 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	SMIM2	Q9BVW6	85 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	IGHV1-69D	A0A0B4J2H0	117 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	IGHV1-69	P01742	117 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	SYNJ2BP	P57105	145 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	EBI3	Q14213	229 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZNF56	Q15929	161 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	OR11H12	B2RN74	326 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	PROK1	P58294	105 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	OR11H1	Q8NG94	326 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	OR11H2	Q8NH07	326 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001		Q9UF83	564 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZNF580	Q9UK33	172 aa		11.17	□□□□□ -0.62
PRPF8-216	ENST00000577001	IGLV2-18	A0A075B6J9	118 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZNF815P	A8K554	130 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	ZNF479	Q96JC4	524 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	TP53TG1	Q9Y2A0	90 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	PPBP	P02775	128 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	C18orf65	Q6ZTR6	163 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	OR9G4	Q8NGQ1	327 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	PRADC1	Q9BSG0	188 aa		11.16	□□□□□ -0.62
PRPF8-216	ENST00000577001	IGHV3OR16-12	A0A075B7B8	117 aa		11.15	□□□□□ -0.62
PRPF8-216	ENST00000577001	TRBV7-1	A0A0A6YYK4	115 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms