RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 S100A11P31949 105 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 SULT1A1P50225 295 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 GAGE1Q13065 139 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 DAZ2Q13117 558 aaKnown RBP4.26□□□□□ -1.73
NUP88-212ENST00000576708 CNPY1Q3B7I2 92 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 THAP6Q8TBB0 222 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 ODF3Q96PU9 254 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 PFDN5Q99471 154 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 VGLL1Q99990 258 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 PYGO2Q9BRQ0 406 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 UPK3BQ9BT76 320 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 SLC25A2Q9BXI2 301 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 Q9H3A6 140 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 LYRM2Q9NU23 88 aaPredicted RBP4.26□□□□□ -1.73
NUP88-212ENST00000576708 MRPL16Q9NX20 251 aaKnown RBP4.26□□□□□ -1.73
NUP88-212ENST00000576708 TMEM14CQ9P0S9 112 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 FUT9Q9Y231 359 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 TIMM9Q9Y5J7 89 aa4.26□□□□□ -1.73
NUP88-212ENST00000576708 RNF222A6NCQ9 220 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 SPINK4O60575 86 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 ZNF253O75346 499 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 EIF3GO75821 320 aaKnown RBP eCLIP4.25□□□□□ -1.73
NUP88-212ENST00000576708 GPX1P07203 203 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 OR10J4P0C629 311 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 PVALBP20472 110 aaPredicted RBP4.25□□□□□ -1.73
NUP88-212ENST00000576708 LINC00315P59091 139 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 KCNIP4Q6PIL6 250 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 EIF4E3Q8N5X7 224 aaKnown RBP4.25□□□□□ -1.73
NUP88-212ENST00000576708 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 NEXN-AS1Q8NBZ9 246 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 Q8TAT8 98 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 MRPL53Q96EL3 112 aaKnown RBP4.25□□□□□ -1.73
NUP88-212ENST00000576708 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 OR5AC2Q9NZP5 309 aa4.25□□□□□ -1.73
NUP88-212ENST00000576708 H3BNG1 76 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 MPDU1O75352 247 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 NXPH4O95158 308 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 CRISP2P16562 243 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 TCL1AP56279 114 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 HBG1P69891 147 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 HBG2P69892 147 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 ATP6V1FQ16864 119 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 LRRC37A5PQ49AS3 106 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
NUP88-212ENST00000576708 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 FXYD5Q96DB9 178 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 PHYHIPLQ96FC7 376 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 LINC00467Q9BRT7 94 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 NPCDR1Q9BY65 106 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 OR51M1Q9H341 326 aa4.24□□□□□ -1.73
NUP88-212ENST00000576708 IGHV1OR15-1A0A075B7D0 117 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 SFTA3P0C7M3 94 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 S100PP25815 95 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 ZNF138P52744 262 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 CRYBA4P53673 196 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 PDE6HQ13956 83 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 UQCC3Q6UW78 93 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 LYPD5Q6UWN5 251 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 ST6GAL2Q96JF0 529 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 C18orf15Q96N68 181 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 PAXXQ9BUH6 204 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 ZNF492Q9P255 531 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 HHLA3Q9XRX5 114 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
NUP88-212ENST00000576708 FAT1Q14517 4588 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 A0A1B0GV72 72 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 E5RGE8 158 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 OR7C2O60412 319 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 DNAH10OSP0CZ25 163 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 SMIM6P0DI80 62 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 RANP62826 216 aaKnown RBP4.22□□□□□ -1.73
NUP88-212ENST00000576708 IFITM3Q01628 133 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 LINC01620Q4KN68 170 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
NUP88-212ENST00000576708 PTH2Q96A98 100 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 CCDC32Q9BV29 185 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 WDR61Q9GZS3 305 aaKnown RBP4.22□□□□□ -1.73
NUP88-212ENST00000576708 PRO0255Q9UI72 69 aa4.22□□□□□ -1.73
NUP88-212ENST00000576708 TRGV4A0A0C4DH28 118 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 LOC100131303A0A0U1RQF7 123 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 GNRH2O43555 120 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 NMBP08949 121 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 AMTP48728 403 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 XGP55808 180 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 KRTAP10-1P60331 282 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
NUP88-212ENST00000576708 ZNF415Q09FC8 603 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 ASAH1Q13510 395 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 ZNF266Q14584 549 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 TMEM183BQ1AE95 376 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 FFAR4Q5NUL3 377 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 WFDC10BQ8IUB3 73 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms