RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PCNPQ8WW12 178 aaKnown RBP16.25■□□□□ 0.19
SNF8-217ENST00000576353 UPK3BQ9BT76 320 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 Q9H8V8 135 aa16.25■□□□□ 0.19
SNF8-217ENST00000576353 MRPS16Q9Y3D3 137 aaKnown RBP16.25■□□□□ 0.19
SNF8-217ENST00000576353 NBDYA0A0U1RRE5 68 aa16.24■□□□□ 0.19
SNF8-217ENST00000576353 PIK3CD-AS1Q5SR53 167 aa16.24■□□□□ 0.19
SNF8-217ENST00000576353 CFAP126Q5VTH2 177 aa16.24■□□□□ 0.19
SNF8-217ENST00000576353 C11orf52Q96A22 123 aa16.24■□□□□ 0.19
SNF8-217ENST00000576353 NACAE9PAV3 2078 aa16.23■□□□□ 0.19
SNF8-217ENST00000576353 RPL35P42766 123 aaKnown RBP16.23■□□□□ 0.19
SNF8-217ENST00000576353 LINC01559Q495D7 138 aa16.23■□□□□ 0.19
SNF8-217ENST00000576353 SOHLH1Q5JUK2 328 aa16.23■□□□□ 0.19
SNF8-217ENST00000576353 NEGR1Q7Z3B1 354 aa16.23■□□□□ 0.19
SNF8-217ENST00000576353 MLST8Q9BVC4 326 aa16.23■□□□□ 0.19
SNF8-217ENST00000576353 PDE6DO43924 150 aa16.22■□□□□ 0.19
SNF8-217ENST00000576353 GYPEP15421 78 aa16.22■□□□□ 0.19
SNF8-217ENST00000576353 SRIP30626 198 aa16.22■□□□□ 0.19
SNF8-217ENST00000576353 MEF2BQ02080 365 aaPredicted RBP16.22■□□□□ 0.19
SNF8-217ENST00000576353 GRIFINA4D1Z8 144 aa16.21■□□□□ 0.19
SNF8-217ENST00000576353 K7EQD1 137 aa16.21■□□□□ 0.19
SNF8-217ENST00000576353 ARMS2P0C7Q2 107 aa16.21■□□□□ 0.19
SNF8-217ENST00000576353 GATA1P15976 413 aaPredicted RBP16.21■□□□□ 0.19
SNF8-217ENST00000576353 TAGLN2P37802 199 aaKnown RBP16.21■□□□□ 0.19
SNF8-217ENST00000576353 A8MWV9 139 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 H3BVH4 76 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 BCL2P10415 239 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 C1orf134Q5TEV5 83 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 ALKAL2Q6UX46 152 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 SYT8Q8NBV8 401 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 VAX2Q9UIW0 290 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 DNAH6Q9C0G6 4158 aa16.2■□□□□ 0.18
SNF8-217ENST00000576353 EPPK1P58107 5090 aaKnown RBP16.2■□□□□ 0.18
SNF8-217ENST00000576353 TMSB15BA0A087X1C1 80 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 RTL8CO15255 209 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 NKX2-5P52952 324 aaPredicted RBP16.19■□□□□ 0.18
SNF8-217ENST00000576353 BLOC1S1P78537 153 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 LYPD5Q6UWN5 251 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 SH2D6Q7Z4S9 175 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 DERL1Q9BUN8 251 aa16.19■□□□□ 0.18
SNF8-217ENST00000576353 TRBV6-4A0A1B0GX49 114 aa16.18■□□□□ 0.18
SNF8-217ENST00000576353 TTC32Q5I0X7 151 aa16.18■□□□□ 0.18
SNF8-217ENST00000576353 PRADC1Q9BSG0 188 aa16.18■□□□□ 0.18
SNF8-217ENST00000576353 PHLDA3Q9Y5J5 127 aa16.18■□□□□ 0.18
SNF8-217ENST00000576353 IGHV3-73A0A0B4J1V6 119 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 MGST1P10620 155 aaKnown RBP16.17■□□□□ 0.18
SNF8-217ENST00000576353 ZFP2Q6ZN57 461 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 ZNF575Q86XF7 245 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 SLC25A29Q8N8R3 303 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 SCRT2Q9NQ03 307 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 MED9Q9NWA0 146 aa16.17■□□□□ 0.18
SNF8-217ENST00000576353 RHOHQ15669 191 aa16.16■□□□□ 0.18
SNF8-217ENST00000576353 CENPWQ5EE01 88 aa16.16■□□□□ 0.18
SNF8-217ENST00000576353 DMRTA1Q5VZB9 504 aa16.16■□□□□ 0.18
SNF8-217ENST00000576353 PRR27Q6MZM9 219 aa16.16■□□□□ 0.18
SNF8-217ENST00000576353 A0A1W2PPQ1 181 aa16.15■□□□□ 0.18
SNF8-217ENST00000576353 PRSS29PA6NIE9 313 aa16.15■□□□□ 0.18
SNF8-217ENST00000576353 NXPH4O95158 308 aa16.15■□□□□ 0.18
SNF8-217ENST00000576353 SMIM12Q96EX1 92 aa16.15■□□□□ 0.18
SNF8-217ENST00000576353 PARLQ9H300 379 aa16.15■□□□□ 0.18
SNF8-217ENST00000576353 LOC100131303A0A0U1RQF7 123 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 SIVA1O15304 175 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 CXCL1P09341 107 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 MED14OSP0DP75 135 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 GNG4P50150 75 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 C6orf223Q8N319 242 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 BOLA1Q9Y3E2 137 aa16.14■□□□□ 0.17
SNF8-217ENST00000576353 RAB19A4D1S5 217 aa16.13■□□□□ 0.17
SNF8-217ENST00000576353 ZFP82Q8N141 532 aa16.13■□□□□ 0.17
SNF8-217ENST00000576353 RHODO00212 210 aa16.12■□□□□ 0.17
SNF8-217ENST00000576353 RPL19P84098 196 aaKnown RBP16.12■□□□□ 0.17
SNF8-217ENST00000576353 DAZAP1Q96EP5 407 aaKnown RBP16.12■□□□□ 0.17
SNF8-217ENST00000576353 JPT2Q9H910 190 aa16.12■□□□□ 0.17
SNF8-217ENST00000576353 M0R381 172 aa16.11■□□□□ 0.17
SNF8-217ENST00000576353 LYPD6BQ8NI32 183 aa16.11■□□□□ 0.17
SNF8-217ENST00000576353 BIN3Q9NQY0 253 aa16.11■□□□□ 0.17
SNF8-217ENST00000576353 IGLV2-8P01709 118 aa16.1■□□□□ 0.17
SNF8-217ENST00000576353 TIRAPP58753 221 aa16.1■□□□□ 0.17
SNF8-217ENST00000576353 UFSP1Q6NVU6 142 aa16.1■□□□□ 0.17
SNF8-217ENST00000576353 SFRP2Q96HF1 295 aa16.1■□□□□ 0.17
SNF8-217ENST00000576353 SAMD10Q9BYL1 202 aa16.1■□□□□ 0.17
SNF8-217ENST00000576353 RBFOX3A6NFN3 312 aa16.09■□□□□ 0.17
SNF8-217ENST00000576353 BTF3P20290 206 aaKnown RBP16.09■□□□□ 0.17
SNF8-217ENST00000576353 Q6ZSN1 163 aa16.09■□□□□ 0.17
SNF8-217ENST00000576353 BIRC6Q9NR09 4857 aa16.08■□□□□ 0.17
SNF8-217ENST00000576353 DNAH10Q8IVF4 4471 aa16.08■□□□□ 0.16
SNF8-217ENST00000576353 SSBP4Q9BWG4 385 aaPredicted RBP16.08■□□□□ 0.16
SNF8-217ENST00000576353 KRTAP1-5Q9BYS1 174 aa16.08■□□□□ 0.16
SNF8-217ENST00000576353 FRAS1Q86XX4 4008 aa16.08■□□□□ 0.16
SNF8-217ENST00000576353 OR5AL1P0C617 328 aa16.07■□□□□ 0.16
SNF8-217ENST00000576353 RPS20P60866 119 aaKnown RBP16.07■□□□□ 0.16
SNF8-217ENST00000576353 FAM74A4Q5TZK3 123 aa16.07■□□□□ 0.16
SNF8-217ENST00000576353 TRBV20OR9-2A0A075B6H5 130 aa16.06■□□□□ 0.16
SNF8-217ENST00000576353 TRAV9-2A0A087WT02 112 aa16.06■□□□□ 0.16
SNF8-217ENST00000576353 SNAI2O43623 268 aa16.06■□□□□ 0.16
SNF8-217ENST00000576353 OR10AG1Q8NH19 301 aa16.06■□□□□ 0.16
SNF8-217ENST00000576353 A0A087WWL8 130 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 A0A1B0GVY2 172 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 C19orf71A6NCJ1 209 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 TMEM250H0YL14 139 aa16.05■□□□□ 0.16
SNF8-217ENST00000576353 CRYGDP07320 174 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms