RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PHOX2AO14813 284 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 AMBPP02760 352 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 HTN3P15516 51 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 CRISP2P16562 243 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 HBBP68871 147 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 COA6Q5JTJ3 125 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 SGK494Q96LW2 274 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
NPLOC4-216ENST00000574344 TRAV8-1A0A0A6YYK1 113 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 A0A1B0GW15 77 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 C19orf71A6NCJ1 209 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 M0R2Z0 102 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 INSP01308 110 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 APCSP02743 223 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 FABP4P15090 132 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 RPS20P60866 119 aaKnown RBP6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 PDZD11Q5EBL8 140 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
NPLOC4-216ENST00000574344 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 SPINK4O60575 86 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 P0DMU3 169 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 S100A12P80511 92 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 HIST1H1AQ02539 215 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 OR10J3Q5JRS4 329 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 C17orf77Q96MU5 243 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
NPLOC4-216ENST00000574344 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 TRAV8-2A0A0B4J237 113 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 M0R3E3 92 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 DAD1P61803 113 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 RIGQ13278 110 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 DNLZQ5SXM8 178 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 TMEM136Q6ZRR5 245 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 SAMD10Q9BYL1 202 aa6.9□□□□□ -1.3
NPLOC4-216ENST00000574344 TRAV12-2A0A075B6T6 113 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 A8MTW9 85 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 AMTNQ6UX39 209 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 VPS13DQ5THJ4 4388 aa6.89□□□□□ -1.31
NPLOC4-216ENST00000574344 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 GRIFINA4D1Z8 144 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 SH2D1AO60880 128 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 HTN1P15515 57 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 SRIP30626 198 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 CAMPP49913 170 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 Q0VG73 95 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 GFI1BQ5VTD9 330 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 OR10J6PQ8NGY7 276 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 KCNS1Q96KK3 526 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 LINC01587Q99440 93 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 NIT2Q9NQR4 276 aa6.88□□□□□ -1.31
NPLOC4-216ENST00000574344 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 A0A1B0GUT8 65 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 A0A1B0GXF2 115 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 PCP4L1A6NKN8 68 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 M0R2N4 97 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 PRM2P04554 102 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 COX8CQ7Z4L0 72 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 Q8TAT8 98 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 DNAH10Q8IVF4 4471 aa6.87□□□□□ -1.31
NPLOC4-216ENST00000574344 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 LYRM9A8MSI8 78 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 ESDP10768 282 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 CDKN1BP46527 198 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 ZNF138P52744 262 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 IQCJQ1A5X6 159 aa6.86□□□□□ -1.31
NPLOC4-216ENST00000574344 TMEM256Q8N2U0 113 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms