RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 CCL18P55774 89 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 CCL20P78556 96 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 VSIG2Q96IQ7 327 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 A0A0J9YY99 117 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 KRBOX1C9JBD0 128 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 ORM1P02763 201 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 S100A4P26447 101 aaKnown RBP6.8□□□□□ -1.32
NDE1-210ENST00000574163 RPL35P42766 123 aaKnown RBP6.8□□□□□ -1.32
NDE1-210ENST00000574163 NKX2-5P52952 324 aaPredicted RBP6.8□□□□□ -1.32
NDE1-210ENST00000574163 CRYBA4P53673 196 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 FHL2Q14192 279 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 ZNF876PQ49A33 203 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 ALKAL2Q6UX46 152 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 BAGE2Q86Y30 109 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
NDE1-210ENST00000574163 MED14OSP0DP75 135 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 CRIP1P50238 77 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 ZNF506Q5JVG8 444 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 OR4C5Q8NGB2 326 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 ZNRF2Q8NHG8 242 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 ZNF479Q96JC4 524 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 UPK3BQ9BT76 320 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 HHLA3Q9XRX5 114 aa6.79□□□□□ -1.32
NDE1-210ENST00000574163 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
NDE1-210ENST00000574163 A0A096LPF7 62 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 A8MWV9 139 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 C9JCJ5 164 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 H3BVH4 76 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 M0R036 132 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 RS1O15537 224 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 NDUFS6O75380 124 aaKnown RBP6.78□□□□□ -1.32
NDE1-210ENST00000574163 SFTA3P0C7M3 94 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 GATA1P15976 413 aaPredicted RBP6.78□□□□□ -1.32
NDE1-210ENST00000574163 MRPL23Q16540 153 aaKnown RBP6.78□□□□□ -1.32
NDE1-210ENST00000574163 CENPWQ5EE01 88 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 Q6ZR54 194 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 SYT8Q8NBV8 401 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
NDE1-210ENST00000574163 DERL1Q9BUN8 251 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
NDE1-210ENST00000574163 RHODO00212 210 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 GNG4P50150 75 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 TTC32Q5I0X7 151 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 ZFP2Q6ZN57 461 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 SH2D6Q7Z4S9 175 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
NDE1-210ENST00000574163 TRBV6-4A0A1B0GX49 114 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 NXPH4O95158 308 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
NDE1-210ENST00000574163 SRIP30626 198 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 RHOHQ15669 191 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 LINC00336Q6ZUF6 198 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 NEGR1Q7Z3B1 354 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 ZFP82Q8N141 532 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 PARLQ9H300 379 aa6.76□□□□□ -1.33
NDE1-210ENST00000574163 FRAS1Q86XX4 4008 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 TRBV20OR9-2A0A075B6H5 130 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 ARMS2P0C7Q2 107 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 GYPEP15421 78 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 TIRAPP58753 221 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 ESRGQ1W209 222 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 ZNF575Q86XF7 245 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 PRADC1Q9BSG0 188 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 MED9Q9NWA0 146 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 PHLDA3Q9Y5J5 127 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
NDE1-210ENST00000574163 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 TMSB15BA0A087X1C1 80 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 A0A1W2PPQ1 181 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 GRIFINA4D1Z8 144 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 C19orf71A6NCJ1 209 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 RBFOX3A6NFN3 312 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 K7EQD1 137 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 SNAI2O43623 268 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 BTF3P20290 206 aaKnown RBP6.74□□□□□ -1.33
NDE1-210ENST00000574163 RPS20P60866 119 aaKnown RBP6.74□□□□□ -1.33
NDE1-210ENST00000574163 SOHLH1Q5JUK2 328 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 PRR27Q6MZM9 219 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
NDE1-210ENST00000574163 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
NDE1-210ENST00000574163 XKRY2A2RUG3 117 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 RAB19A4D1S5 217 aa6.73□□□□□ -1.33
NDE1-210ENST00000574163 RPL19P84098 196 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms