RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 P01737 135 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 IGHV3-53P01767 116 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 CXCL1P09341 107 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 HOXA5P20719 270 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 RPS20P60866 119 aaKnown RBP8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 PEA15Q15121 130 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 PCNPQ8WW12 178 aaKnown RBP8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 SMDT1Q9H4I9 107 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
TRAPPC1-206ENST00000573989 NACAE9PAV3 2078 aa8.96□□□□□ -0.97
TRAPPC1-206ENST00000573989 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 A8MWV9 139 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 NUDT3O95989 172 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 IGLV2-8P01709 118 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 MED14OSP0DP75 135 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-206ENST00000573989 A0A0J9YY99 117 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 PGPEP1LA6NFU8 196 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 PAX4O43316 350 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 ZFP82Q8N141 532 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 LYSTQ99698 3801 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 LY96Q9Y6Y9 160 aa8.95□□□□□ -0.98
TRAPPC1-206ENST00000573989 C19orf71A6NCJ1 209 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 RS1O15537 224 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 SRP19P09132 144 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 RPL19P84098 196 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 FHL2Q14192 279 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 FAM74A3Q4VXF1 159 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 CFAP126Q5VTH2 177 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 OR2D3Q8NGH3 330 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
TRAPPC1-206ENST00000573989 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 CRYBA4P53673 196 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 CCL18P55774 89 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 RNF212Q495C1 297 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 POM121L12Q8N7R1 296 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 SCRT2Q9NQ03 307 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
TRAPPC1-206ENST00000573989 M0R381 172 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 RHODO00212 210 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 SPANXN1Q5VSR9 72 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 ZFP2Q6ZN57 461 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
TRAPPC1-206ENST00000573989 KMT2CQ8NEZ4 4911 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 A0A1W2PPQ1 181 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 SNAI2O43623 268 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 FAM3BP58499 235 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 CLLU1Q5K131 121 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 ZNF575Q86XF7 245 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 FER1L6-AS1Q8NA97 138 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 VSIG2Q96IQ7 327 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 PRADC1Q9BSG0 188 aa8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC1-206ENST00000573989 TRBV6-4A0A1B0GX49 114 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 F2Z2F3 143 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 K7EN84 100 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 GATCO43716 136 aaKnown RBP8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 ERVFC1-1P60608 527 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 RHOHQ15669 191 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 TMEM241Q24JQ0 296 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 FAM231DQ6ZW35 169 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 SFRP2Q96HF1 295 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 TPPP3Q9BW30 176 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 ALMS1Q8TCU4 4167 aa8.9□□□□□ -0.98
TRAPPC1-206ENST00000573989 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 GYPEP15421 78 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 SRIP30626 198 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 CACNG7P62955 275 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 LINC01551Q86U37 167 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 OR10AG1Q8NH19 301 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 NAT8Q9UHE5 227 aa8.89□□□□□ -0.99
TRAPPC1-206ENST00000573989 A0A096LPF7 62 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 A8MWL6 223 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 NXPH4O95158 308 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 SMIM17P0DL12 118 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 GZMBP10144 247 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 NEGR1Q7Z3B1 354 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 C15orf54Q8N8G6 183 aa8.88□□□□□ -0.99
TRAPPC1-206ENST00000573989 K7EQD1 137 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 IFITM2Q01629 132 aa8.87□□□□□ -0.99
TRAPPC1-206ENST00000573989 CT83Q5H943 113 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms