RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 PARLQ9H300 379 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
RPAIN-213ENST00000573577 PEA15Q15121 130 aa9.54□□□□□ -0.88
RPAIN-213ENST00000573577 DNLZQ5SXM8 178 aa9.54□□□□□ -0.88
RPAIN-213ENST00000573577 C9orf85Q96MD7 179 aa9.54□□□□□ -0.88
RPAIN-213ENST00000573577 IL36BQ9NZH7 164 aa9.54□□□□□ -0.88
RPAIN-213ENST00000573577 TRBV20OR9-2A0A075B6H5 130 aa9.53□□□□□ -0.88
RPAIN-213ENST00000573577 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
RPAIN-213ENST00000573577 CXCL1P09341 107 aa9.53□□□□□ -0.88
RPAIN-213ENST00000573577 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
RPAIN-213ENST00000573577 C15orf53Q8NAA6 179 aa9.53□□□□□ -0.88
RPAIN-213ENST00000573577 PTH2Q96A98 100 aa9.53□□□□□ -0.88
RPAIN-213ENST00000573577 TMSB15BA0A087X1C1 80 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 XKRY2A2RUG3 117 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 H3BVH4 76 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 P01737 135 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 SRP19P09132 144 aaKnown RBP9.52□□□□□ -0.89
RPAIN-213ENST00000573577 SLAQ13239 276 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 ZNF876PQ49A33 203 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 PIK3CD-AS1Q5SR53 167 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 TMEM88Q6PEY1 159 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 LY96Q9Y6Y9 160 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
RPAIN-213ENST00000573577 TRAV4A0A0B4J268 109 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 PGPEP1LA6NFU8 196 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 ZNF727A8MUV8 499 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
RPAIN-213ENST00000573577 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 CLLU1Q5K131 121 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 OR4C5Q8NGB2 326 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
RPAIN-213ENST00000573577 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
RPAIN-213ENST00000573577 CIDEAO60543 219 aa9.5□□□□□ -0.89
RPAIN-213ENST00000573577 IGHV3-53P01767 116 aa9.5□□□□□ -0.89
RPAIN-213ENST00000573577 RPL19P84098 196 aaKnown RBP9.5□□□□□ -0.89
RPAIN-213ENST00000573577 OCC1Q8TAD7 63 aa9.5□□□□□ -0.89
RPAIN-213ENST00000573577 KMT2AQ03164 3969 aa9.5□□□□□ -0.89
RPAIN-213ENST00000573577 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 H3BNG1 76 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 P0DMU3 169 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 HOXA5P20719 270 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 ZFP82Q8N141 532 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 SCRT2Q9NQ03 307 aa9.49□□□□□ -0.89
RPAIN-213ENST00000573577 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
RPAIN-213ENST00000573577 A8MWV9 139 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 SFTA3P0C7M3 94 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 IFITM2Q01629 132 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
RPAIN-213ENST00000573577 MUC4Q99102 2169 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 K7EN84 100 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 RS1O15537 224 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 NUDT3O95989 172 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 OR5AL1P0C617 328 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
RPAIN-213ENST00000573577 FHL2Q14192 279 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 SOHLH1Q5JUK2 328 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 CFAP126Q5VTH2 177 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 ZNF575Q86XF7 245 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
RPAIN-213ENST00000573577 A0A0J9YY99 117 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 M0R381 172 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 PAX4O43316 350 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 SNAI2O43623 268 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 FAM231DQ6ZW35 169 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 LINC01551Q86U37 167 aa9.46□□□□□ -0.9
RPAIN-213ENST00000573577 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
RPAIN-213ENST00000573577 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
RPAIN-213ENST00000573577 A0A1W2PPQ1 181 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 C9JQL5 133 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 RHODO00212 210 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 CRYBA4P53673 196 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 ZFP2Q6ZN57 461 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 RNASE7Q9H1E1 156 aaKnown RBP9.45□□□□□ -0.9
RPAIN-213ENST00000573577 NAT8Q9UHE5 227 aa9.45□□□□□ -0.9
RPAIN-213ENST00000573577 F2Z2F3 143 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
RPAIN-213ENST00000573577 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 C15orf54Q8N8G6 183 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 VSIG2Q96IQ7 327 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 ICOSQ9Y6W8 199 aa9.44□□□□□ -0.9
RPAIN-213ENST00000573577 A8MWL6 223 aa9.43□□□□□ -0.9
RPAIN-213ENST00000573577 NXPH4O95158 308 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms