RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 IGHV3OR16-13A0A075B7E8 117 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 IGKV2-40A0A087WW87 121 aaPredicted RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 IGHV3-49A0A0A0MS15 119 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 IGHV3-74A0A0B4J1X5 117 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 C19orf71A6NCJ1 209 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 HSBP1L1C9JCN9 74 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 TSTD3H0UI37 97 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 M0R3E3 92 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 TCAPO15273 167 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 SPINK4O60575 86 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 SH2D1AO60880 128 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 IGKV2D-40P01614 121 aaPredicted RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 DNLZQ5SXM8 178 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 FOXI2Q6ZQN5 318 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 ORMDL3Q8N138 153 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 OR8A1Q8NGG7 326 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 CHCHD1Q96BP2 118 aaKnown RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.79
NCBP3-202ENST00000572988 CITED1Q99966 193 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 NAGKQ9UJ70 344 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
NCBP3-202ENST00000572988 TRAV8-1A0A0A6YYK1 113 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 LOC105371267A0A1B0GV96 52 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 C2orf70A6NJV1 201 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 H7C1H1 209 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 CCL24O00175 119 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 IGLV2-8P01709 118 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 FABP4P15090 132 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 SRIP30626 198 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 CKS2P33552 79 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 CDKN1BP46527 198 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 TFPI2P48307 235 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 INSL3P51460 131 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 KLF5Q13887 457 aaPredicted RBP3.89□□□□□ -1.79
NCBP3-202ENST00000572988 COA6Q5JTJ3 125 aaKnown RBP3.89□□□□□ -1.79
NCBP3-202ENST00000572988 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 STHQ8IWL8 128 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 MYOZ3Q8TDC0 251 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 C17orf77Q96MU5 243 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 YPEL4Q96NS1 127 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 C20orf144Q9BQM9 153 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM208Q9BTX3 173 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 AGPAT4-IT1Q9H0P7 198 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 MS4A6AQ9H2W1 248 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 MAP1LC3AQ9H492 121 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 SIGLEC8Q9NYZ4 499 aa3.89□□□□□ -1.79
NCBP3-202ENST00000572988 IGHV4OR15-8A0A075B7B6 117 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 A0A087WW49 117 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF705FA8MVS1 300 aaPredicted RBP3.88□□□□□ -1.79
NCBP3-202ENST00000572988 OR11H12B2RN74 326 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 K7EMI3 77 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 M0R2Z0 102 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 PHOX2AO14813 284 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 SCGB1D1O95968 90 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 RNASE4P34096 147 aaKnown RBP3.88□□□□□ -1.79
NCBP3-202ENST00000572988 AMTP48728 403 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 SMAGPQ0VAQ4 97 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 PMCHL1Q16048 86 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM95Q3KNT9 176 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
NCBP3-202ENST00000572988 LYZL1Q6UWQ5 148 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 UNQ9165/PRO28630Q6UXU0 137 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 GTSCR1Q86UQ5 136 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM256Q8N2U0 113 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 AP1S3Q96PC3 154 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 C12orf57Q99622 126 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 VGLL1Q99990 258 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
NCBP3-202ENST00000572988 SMAD5-AS1Q9Y6J3 95 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 MGAM2Q2M2H8 2515 aa3.88□□□□□ -1.79
NCBP3-202ENST00000572988 LOC102724200A0A096LPH7 203 aaPredicted RBP3.87□□□□□ -1.79
NCBP3-202ENST00000572988 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 C7orf71A4D174 169 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 K7EQG2 157 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 SAP30O75446 220 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 CA1P00915 261 aaPredicted RBP3.87□□□□□ -1.79
NCBP3-202ENST00000572988 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 APOHP02749 345 aaPredicted RBP3.87□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF688P0C7X2 276 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 LINC00614P0C842 121 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF705DP0CH99 300 aaPredicted RBP3.87□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF705BP0CI00 300 aaPredicted RBP3.87□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF493Q6ZR52 646 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 OR10D4PQ8NGN7 298 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 OR10AG1Q8NH19 301 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 Q8TAT8 98 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 MRAP2Q96G30 205 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 URB1-AS1Q96HZ7 61 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
NCBP3-202ENST00000572988 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms