RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
CHD3-215ENST00000572750 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
CHD3-215ENST00000572750 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
CHD3-215ENST00000572750 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
CHD3-215ENST00000572750 ZNF506Q5JVG8 444 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
CHD3-215ENST00000572750 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
CHD3-215ENST00000572750 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
CHD3-215ENST00000572750 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 P0DMU3 169 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 CEBPGP53567 150 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 ZNF575Q86XF7 245 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 EIF5A2Q9GZV4 153 aaKnown RBP11.03□□□□□ -0.64
CHD3-215ENST00000572750 PARLQ9H300 379 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 IL36BQ9NZH7 164 aa11.03□□□□□ -0.64
CHD3-215ENST00000572750 FHL2Q14192 279 aa11.02□□□□□ -0.65
CHD3-215ENST00000572750 UBE2DNLQ8IWF7 75 aa11.02□□□□□ -0.65
CHD3-215ENST00000572750 OR4C5Q8NGB2 326 aa11.02□□□□□ -0.65
CHD3-215ENST00000572750 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.65
CHD3-215ENST00000572750 HERC1Q15751 4861 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 TMEM250H0YL14 139 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 ARMS2P0C7Q2 107 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 DNLZQ5SXM8 178 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
CHD3-215ENST00000572750 CRYBA4P53673 196 aa11□□□□□ -0.65
CHD3-215ENST00000572750 CFAP126Q5VTH2 177 aa11□□□□□ -0.65
CHD3-215ENST00000572750 PRO0255Q9UI72 69 aa11□□□□□ -0.65
CHD3-215ENST00000572750 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
CHD3-215ENST00000572750 IGHV3-73A0A0B4J1V6 119 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 H3BNG1 76 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 PAX4O43316 350 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 PTH2Q96A98 100 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
CHD3-215ENST00000572750 C19orf71A6NCJ1 209 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 K7EN84 100 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 M0R381 172 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 RS1O15537 224 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 DMRTA1Q5VZB9 504 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
CHD3-215ENST00000572750 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 A0A096LPF7 62 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 SRP19P09132 144 aaKnown RBP10.97□□□□□ -0.65
CHD3-215ENST00000572750 CXCL1P09341 107 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 GZMBP10144 247 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 SYT8Q8NBV8 401 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
CHD3-215ENST00000572750 JPT2Q9H910 190 aa10.97□□□□□ -0.65
CHD3-215ENST00000572750 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.65
CHD3-215ENST00000572750 P01737 135 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 MED14OSP0DP75 135 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 GATA1P15976 413 aaPredicted RBP10.96□□□□□ -0.65
CHD3-215ENST00000572750 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
CHD3-215ENST00000572750 SLAQ13239 276 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 ZFP82Q8N141 532 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 ICOSQ9Y6W8 199 aa10.96□□□□□ -0.65
CHD3-215ENST00000572750 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 LOC100131303A0A0U1RQF7 123 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 A8MWV9 139 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 GYPEP15421 78 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 RNF212Q495C1 297 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 SAMD10Q9BYL1 202 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
CHD3-215ENST00000572750 BIN3Q9NQY0 253 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 LINC00588Q9Y4M8 146 aa10.95□□□□□ -0.66
CHD3-215ENST00000572750 C9JQL5 133 aa10.94□□□□□ -0.66
CHD3-215ENST00000572750 SNAI2O43623 268 aa10.94□□□□□ -0.66
CHD3-215ENST00000572750 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
CHD3-215ENST00000572750 NXPH4O95158 308 aa10.94□□□□□ -0.66
CHD3-215ENST00000572750 CCL18P55774 89 aa10.94□□□□□ -0.66
CHD3-215ENST00000572750 FAM74A4Q5TZK3 123 aa10.94□□□□□ -0.66
CHD3-215ENST00000572750 IGLV2-18A0A075B6J9 118 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 A0A087WWL8 130 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 ZNF727A8MUV8 499 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 K7EQD1 137 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 OR5AL1P0C617 328 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 SSTP61278 116 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 ESRGQ1W209 222 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
CHD3-215ENST00000572750 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
CHD3-215ENST00000572750 SRIP30626 198 aa10.92□□□□□ -0.66
CHD3-215ENST00000572750 RPS20P60866 119 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms