RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 SACSQ9NZJ4 4579 aa9.73□□□□□ -0.85
RPAIN-211ENST00000572174 H3BVH4 76 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 RHODO00212 210 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
RPAIN-211ENST00000572174 MGST1P10620 155 aaKnown RBP9.72□□□□□ -0.85
RPAIN-211ENST00000572174 SRIP30626 198 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 ZNF506Q5JVG8 444 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 LYPD6BQ8NI32 183 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 DAZAP1Q96EP5 407 aaKnown RBP9.72□□□□□ -0.85
RPAIN-211ENST00000572174 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 ZNF479Q96JC4 524 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 PRADC1Q9BSG0 188 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 RYR2Q92736 4967 aa9.72□□□□□ -0.85
RPAIN-211ENST00000572174 XKRY2A2RUG3 117 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 SFTA3P0C7M3 94 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 CRIP1P50238 77 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 TTC32Q5I0X7 151 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 PRR27Q6MZM9 219 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 ZFP82Q8N141 532 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 UPK3BQ9BT76 320 aa9.71□□□□□ -0.86
RPAIN-211ENST00000572174 A0A096LPF7 62 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 RS1O15537 224 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 RPS20P60866 119 aaKnown RBP9.7□□□□□ -0.86
RPAIN-211ENST00000572174 RHOHQ15669 191 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 CFAP126Q5VTH2 177 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
RPAIN-211ENST00000572174 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
RPAIN-211ENST00000572174 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
RPAIN-211ENST00000572174 PGPEP1LA6NFU8 196 aa9.69□□□□□ -0.86
RPAIN-211ENST00000572174 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
RPAIN-211ENST00000572174 GATA1P15976 413 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-211ENST00000572174 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
RPAIN-211ENST00000572174 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
RPAIN-211ENST00000572174 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
RPAIN-211ENST00000572174 GYPEP15421 78 aa9.68□□□□□ -0.86
RPAIN-211ENST00000572174 LINC00336Q6ZUF6 198 aa9.68□□□□□ -0.86
RPAIN-211ENST00000572174 EIF5A2Q9GZV4 153 aaKnown RBP9.68□□□□□ -0.86
RPAIN-211ENST00000572174 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
RPAIN-211ENST00000572174 GRIFINA4D1Z8 144 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 K7EQD1 137 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 P01737 135 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 OR5AL1P0C617 328 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 PARLQ9H300 379 aa9.67□□□□□ -0.86
RPAIN-211ENST00000572174 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
RPAIN-211ENST00000572174 ESRGQ1W209 222 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 TOR2AQ5JU69 321 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 TEX261Q6UWH6 196 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 FAM210AQ96ND0 272 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 Q9H8V8 135 aa9.66□□□□□ -0.86
RPAIN-211ENST00000572174 IGLV2-18A0A075B6J9 118 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 NBDYA0A0U1RRE5 68 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 K7EP13 123 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 M0R381 172 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 SNAI2O43623 268 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 TIRAPP58753 221 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 SPANXN1Q5VSR9 72 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 Q6ZR54 194 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
RPAIN-211ENST00000572174 F2Z2F3 143 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 M0R2N4 97 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 SIVA1O15304 175 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 NXPH4O95158 308 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 IGLV2-8P01709 118 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-211ENST00000572174 SMDT1Q9H4I9 107 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
RPAIN-211ENST00000572174 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 TRAV9-2A0A087WT02 112 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 C19orf71A6NCJ1 209 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 CACNG7P62955 275 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
RPAIN-211ENST00000572174 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
RPAIN-211ENST00000572174 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
RPAIN-211ENST00000572174 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
RPAIN-211ENST00000572174 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-211ENST00000572174 SMIM7Q9BQ49 75 aa9.62□□□□□ -0.87
RPAIN-211ENST00000572174 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
RPAIN-211ENST00000572174 TRBV10-1A0A0K0K1A3 114 aa9.61□□□□□ -0.87
RPAIN-211ENST00000572174 CEBPGP53567 150 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms