RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PKD1P98161 4303 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 IGHV3-73A0A0B4J1V6 119 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 GRIFINA4D1Z8 144 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 PRSS29PA6NIE9 313 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 K7EQD1 137 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 M0R036 132 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 RS1O15537 224 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ORM1P02763 201 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 AKR1C3P42330 323 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 UBE2G1P62253 170 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ZNF674Q2M3X9 581 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ZNF876PQ49A33 203 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 TOR2AQ5JU69 321 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ZNF506Q5JVG8 444 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 CFAP126Q5VTH2 177 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 LYPD5Q6UWN5 251 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ALKAL2Q6UX46 152 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 UPK3BQ9BT76 320 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 JPT2Q9H910 190 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ZFP30Q9Y2G7 519 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 ICOSQ9Y6W8 199 aa7.03□□□□□ -1.28
GTF3C1-213ENST00000571886 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 B4DEV8 164 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 GYPEP15421 78 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 GATA1P15976 413 aaPredicted RBP7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 SLAQ13239 276 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 C1orf134Q5TEV5 83 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 Q6ZSN1 163 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 LINC00336Q6ZUF6 198 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 GNG13Q9P2W3 67 aa7.02□□□□□ -1.29
GTF3C1-213ENST00000571886 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 TEX46H3BTG2 121 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 H3BVH4 76 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 RAB5CP51148 216 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 MRPL23Q16540 153 aaKnown RBP7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 FAM162BQ5T6X4 162 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 EIF5AL1Q6IS14 154 aaKnown RBP7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 PTH2Q96A98 100 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 TCEAL7Q9BRU2 100 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 DERL1Q9BUN8 251 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 SAMD10Q9BYL1 202 aa7.01□□□□□ -1.29
GTF3C1-213ENST00000571886 ARMS2P0C7Q2 107 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 S100A4P26447 101 aaKnown RBP7□□□□□ -1.29
GTF3C1-213ENST00000571886 ASIPP42127 132 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 RPL19P84098 196 aaKnown RBP7□□□□□ -1.29
GTF3C1-213ENST00000571886 TNP2Q05952 138 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 LINC01559Q495D7 138 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 DNLZQ5SXM8 178 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 NEGR1Q7Z3B1 354 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 BAGE2Q86Y30 109 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 C6orf223Q8N319 242 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 IL36BQ9NZH7 164 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 Q9UF83 564 aa7□□□□□ -1.29
GTF3C1-213ENST00000571886 NXPH4O95158 308 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 SRIP30626 198 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 UFSP1Q6NVU6 142 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 C11orf52Q96A22 123 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 PARLQ9H300 379 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 TNFRSF18Q9Y5U5 241 aa6.99□□□□□ -1.29
GTF3C1-213ENST00000571886 PKHD1P08F94 4074 aa6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 SIVA1O15304 175 aa6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 IGLV2-8P01709 118 aa6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 S100A9P06702 114 aaKnown RBP6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 RPL35P42766 123 aaKnown RBP6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 WFDC10BQ8IUB3 73 aa6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 PCNPQ8WW12 178 aaKnown RBP6.98□□□□□ -1.29
GTF3C1-213ENST00000571886 HERC2O95714 4834 aa6.97□□□□□ -1.29
GTF3C1-213ENST00000571886 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
GTF3C1-213ENST00000571886 PRR27Q6MZM9 219 aa6.97□□□□□ -1.29
GTF3C1-213ENST00000571886 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
GTF3C1-213ENST00000571886 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
GTF3C1-213ENST00000571886 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 A0A087WWL8 130 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 TRBV6-4A0A1B0GX49 114 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 A8MWV9 139 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 CRYGDP07320 174 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 CENPWQ5EE01 88 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 SOHLH1Q5JUK2 328 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 PIK3CD-AS1Q5SR53 167 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 TXNDC17Q9BRA2 123 aa6.96□□□□□ -1.3
GTF3C1-213ENST00000571886 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 A0A1W2PPQ1 181 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 M0R381 172 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 CIDEAO60543 219 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 BCL2P10415 239 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 MGST1P10620 155 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 LINC00315P59091 139 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 MEF2BQ02080 365 aaPredicted RBP6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 RHOHQ15669 191 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
GTF3C1-213ENST00000571886 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms