RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 IGHV3-73A0A0B4J1V6 119 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 C9JAW5 83 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 IGLV1-47P01700 117 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 ANXA2RQ3ZCQ2 193 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 TP73-AS1Q9UF72 201 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 NEGR1Q7Z3B1 354 aa8.71□□□□□ -1.02
PCDHGA4-201ENST00000571252 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 M0R2P5 195 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 CFHR4Q92496 578 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 DAZ1Q9NQZ3 744 aaKnown RBP8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 TRAV8-4A0A0B4J246 113 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 NPC2P61916 151 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 KLHL30-AS1Q8NEE0 82 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 PMVKQ15126 192 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 FOXE3Q13461 319 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 LINC00574Q9H8X3 128 aa8.7□□□□□ -1.02
PCDHGA4-201ENST00000571252 IGLV11-55A0A075B6I3 123 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 SDHAF1A6NFY7 115 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 FXYD2P54710 66 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 LINC00310P59036 64 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 SPXQ9BT56 116 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 AZU1P20160 251 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 NACAE9PAV3 2078 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 CTSGP08311 255 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 RUSC1-AS1Q66K80 236 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
PCDHGA4-201ENST00000571252 TRBV20-1A0A075B6N2 111 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 LOXL1Q08397 574 aaPredicted RBP8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 SPRY2O43597 315 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 OR11H6Q8NGC7 330 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 MGAQ8IWI9 3026 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 PRSS29PA6NIE9 313 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 CHCHD5Q9BSY4 110 aa8.68□□□□□ -1.02
PCDHGA4-201ENST00000571252 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 TRBV7-9A0A0J9YWB2 115 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 MAPK1IP1LQ8NDC0 245 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 PPDPFLQ8WWR9 84 aa8.67□□□□□ -1.02
PCDHGA4-201ENST00000571252 TRBV6-1A0A0K0K1D8 114 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 K7EMI3 77 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 BOD1L1Q8NFC6 3051 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 WI2-2373I1.2A0A1W2PRP0 233 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 IGLL5B9A064 214 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 CRPP02741 224 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 MALP21145 153 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 C1orf159Q96HA4 380 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 ANKRD11Q6UB99 2663 aaPredicted RBP8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 IGHV7-81A0A0B4J1V7 117 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 LY6G5BQ8NDX9 201 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 Q96MF0 132 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 NDUFA4O00483 81 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 TRPT1Q86TN4 253 aaKnown RBP8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 NPBQ8NG41 125 aa8.66□□□□□ -1.02
PCDHGA4-201ENST00000571252 BUB3O43684 328 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 F6UB75 175 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
PCDHGA4-201ENST00000571252 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.03
PCDHGA4-201ENST00000571252 IGHV1-69P01742 117 aa8.65□□□□□ -1.03
PCDHGA4-201ENST00000571252 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.03
PCDHGA4-201ENST00000571252 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.03
PCDHGA4-201ENST00000571252 HIGD1BQ9P298 99 aa8.65□□□□□ -1.03
PCDHGA4-201ENST00000571252 WFDC2Q14508 124 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 ODF1Q14990 250 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 GNRH2O43555 120 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 J3QQQ9 107 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 SYNJ2BPP57105 145 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 FANCD2OSQ96PS1 177 aa8.64□□□□□ -1.03
PCDHGA4-201ENST00000571252 FGF6P10767 208 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 DSCAMO60469 2012 aa8.63□□□□□ -1.03
PCDHGA4-201ENST00000571252 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms