RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
SCARF1-204ENST00000570902 ZNF726P1Q15940 193 aa12.63□□□□□ -0.39
SCARF1-204ENST00000570902 SYT8Q8NBV8 401 aa12.63□□□□□ -0.39
SCARF1-204ENST00000570902 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
SCARF1-204ENST00000570902 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 FBLL1A6NHQ2 334 aaKnown RBP12.62□□□□□ -0.39
SCARF1-204ENST00000570902 IGHV3-30P01768 117 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 IGHV3-30-3P0DP02 117 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 IGHV3-30-5P0DP03 117 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
SCARF1-204ENST00000570902 A0A0D9SG52 128 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 CTXND1A0A1B0GTU2 59 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 GNRH2O43555 120 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 CIDEAO60543 219 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 LELP1Q5T871 98 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 Q6ZNX1 250 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
SCARF1-204ENST00000570902 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 SUMO1P63165 101 aaKnown RBP12.6□□□□□ -0.39
SCARF1-204ENST00000570902 RHOHQ15669 191 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 KCNS1Q96KK3 526 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 TREM1Q9NP99 234 aa12.6□□□□□ -0.39
SCARF1-204ENST00000570902 TRBV6-4A0A1B0GX49 114 aa12.59□□□□□ -0.39
SCARF1-204ENST00000570902 F6UZH7 168 aa12.59□□□□□ -0.39
SCARF1-204ENST00000570902 BCL2L11O43521 198 aa12.59□□□□□ -0.39
SCARF1-204ENST00000570902 TYMSP04818 313 aa12.59□□□□□ -0.39
SCARF1-204ENST00000570902 TVP23CQ96ET8 276 aa12.59□□□□□ -0.39
SCARF1-204ENST00000570902 KANTRA0A1W2PQU2 76 aa12.58□□□□□ -0.4
SCARF1-204ENST00000570902 GGTLC3B5MD39 225 aa12.58□□□□□ -0.4
SCARF1-204ENST00000570902 TCRAP04437 139 aa12.58□□□□□ -0.4
SCARF1-204ENST00000570902 FGF8P55075 233 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-204ENST00000570902 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-204ENST00000570902 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
SCARF1-204ENST00000570902 TRAV8-3A0A0A6YYJ7 113 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 SERTM2A0A1B0GWG4 89 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 K7EQM0 130 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 UBE2G2P60604 165 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 TMUB2Q71RG4 321 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
SCARF1-204ENST00000570902 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 PFDN1O60925 122 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 FHITP49789 147 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 WFDC2Q14508 124 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 PSG8Q9UQ74 426 aa12.56□□□□□ -0.4
SCARF1-204ENST00000570902 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 MAP1LC3B2A6NCE7 125 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 RS1O15537 224 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 SEC11BP0C7V7 166 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 TOR2AQ5JU69 321 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 PRNTQ86SH4 94 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 CYB561D1Q8N8Q1 229 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 MAP1LC3BQ9GZQ8 125 aa12.55□□□□□ -0.4
SCARF1-204ENST00000570902 hCG_2014768A0A024R1R8 64 aa12.54□□□□□ -0.4
SCARF1-204ENST00000570902 IFNA7P01567 189 aa12.54□□□□□ -0.4
SCARF1-204ENST00000570902 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-204ENST00000570902 COX11Q9Y6N1 276 aa12.54□□□□□ -0.4
SCARF1-204ENST00000570902 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-204ENST00000570902 LECT2O14960 151 aa12.53□□□□□ -0.4
SCARF1-204ENST00000570902 OXTP01178 125 aa12.53□□□□□ -0.4
SCARF1-204ENST00000570902 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
SCARF1-204ENST00000570902 MGST1P10620 155 aaKnown RBP12.53□□□□□ -0.4
SCARF1-204ENST00000570902 LGALSLQ3ZCW2 172 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-204ENST00000570902 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
SCARF1-204ENST00000570902 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 FAM74A7A6NL05 159 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
SCARF1-204ENST00000570902 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
SCARF1-204ENST00000570902 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 FAM213BQ8TBF2 198 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 LINC00479Q96M42 142 aa12.52□□□□□ -0.41
SCARF1-204ENST00000570902 LRP1Q07954 4544 aaKnown RBP12.51□□□□□ -0.41
SCARF1-204ENST00000570902 GCGP01275 180 aa12.51□□□□□ -0.41
SCARF1-204ENST00000570902 TPT1P13693 172 aaKnown RBP12.51□□□□□ -0.41
SCARF1-204ENST00000570902 ZFP69Q49AA0 526 aa12.51□□□□□ -0.41
SCARF1-204ENST00000570902 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
SCARF1-204ENST00000570902 SFT2D1Q8WV19 159 aa12.51□□□□□ -0.41
SCARF1-204ENST00000570902 UBR4Q5T4S7 5183 aa12.5□□□□□ -0.41
SCARF1-204ENST00000570902 PEX7O00628 323 aa12.5□□□□□ -0.41
SCARF1-204ENST00000570902 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
SCARF1-204ENST00000570902 PTH2Q96A98 100 aa12.5□□□□□ -0.41
SCARF1-204ENST00000570902 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
SCARF1-204ENST00000570902 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
SCARF1-204ENST00000570902 A0A1B0GV50 99 aa12.49□□□□□ -0.41
SCARF1-204ENST00000570902 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
SCARF1-204ENST00000570902 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms