RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ASB13Q8WXK3 278 aa6.58□□□□□ -1.36
CTDNEP1-202ENST00000570380 KCNS1Q96KK3 526 aa6.58□□□□□ -1.36
CTDNEP1-202ENST00000570380 SEC22CQ9BRL7 303 aa6.58□□□□□ -1.36
CTDNEP1-202ENST00000570380 NUDT15Q9NV35 164 aa6.58□□□□□ -1.36
CTDNEP1-202ENST00000570380 A0A087WX48 190 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 HLA-DQA1P01909 254 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 RPL19P84098 196 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 BAXQ07812 192 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 OR2T35Q8NGX2 323 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 CHAC2Q8WUX2 184 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 TVP23CQ96ET8 276 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 C9orf85Q96MD7 179 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 CHCHD7Q9BUK0 85 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 GSKIPQ9P0R6 139 aa6.57□□□□□ -1.36
CTDNEP1-202ENST00000570380 FAM240BA0A1B0GVZ2 78 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 F6UZH7 168 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 CCSO14618 274 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 DMRTA1Q5VZB9 504 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 C14orf178Q8N769 122 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 PTH2Q96A98 100 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 RNF185Q96GF1 192 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 PARLQ9H300 379 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
CTDNEP1-202ENST00000570380 FAM24AA6NFZ4 105 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 L7N2F9 121 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 FGF7P21781 194 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 BCAP31P51572 246 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 FGF8P55075 233 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 VAMP2P63027 116 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 MZT2BQ6NZ67 158 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 ZFP2Q6ZN57 461 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 MITD1Q8WV92 249 aa6.55□□□□□ -1.36
CTDNEP1-202ENST00000570380 PGPA6NDG6 321 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 RNASE3P12724 160 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 KCNIP4Q6PIL6 250 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 C15orf54Q8N8G6 183 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 ENKURQ8TC29 256 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
CTDNEP1-202ENST00000570380 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 CRPP02741 224 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 S100A11P31949 105 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 UFSP1Q6NVU6 142 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 REG3GQ6UW15 175 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 TMEM75Q8N9X5 138 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 NPCDR1Q9BY65 106 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 JPT2Q9H910 190 aa6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 LSM5Q9Y4Y9 91 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-202ENST00000570380 A8MWV9 139 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 TMEM262E9PQX1 116 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 OR7C2O60412 319 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 OR10G7Q8NGN6 311 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 NMES1Q9C002 83 aa6.52□□□□□ -1.37
CTDNEP1-202ENST00000570380 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 IGSF23A1L1A6 192 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 FAM25EA8MYX2 175 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 ANGP03950 147 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 SLPIP03973 132 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 SULT1A1P50225 295 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 MIAQ16674 131 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 MPV17L2Q567V2 206 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 GOLT1AQ6ZVE7 132 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 CLRN3Q8NCR9 226 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 OR2G3Q8NGZ4 309 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
CTDNEP1-202ENST00000570380 INMT-MINDY4F8WBC2 141 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 SIX6O95475 246 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 DEFA1P59665 94 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 DEFA3P59666 94 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 UBE2L3P68036 154 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 TMEM252Q8N6L7 170 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 MARVELD1Q9BSK0 173 aa6.5□□□□□ -1.37
CTDNEP1-202ENST00000570380 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 hDV102S1A0JD36 115 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 TAAR5O14804 337 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 ATP6V1FQ16864 119 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 THAP6Q8TBB0 222 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
CTDNEP1-202ENST00000570380 OTORQ9NRC9 128 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms