RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 A8MWV9 139 aa13.98□□□□□ -0.17
PKD1-240ENST00000570253 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
PKD1-240ENST00000570253 TCRAP04437 139 aa13.98□□□□□ -0.17
PKD1-240ENST00000570253 CDC34P49427 236 aaPredicted RBP13.98□□□□□ -0.17
PKD1-240ENST00000570253 H2BFSP57053 126 aa13.98□□□□□ -0.17
PKD1-240ENST00000570253 RAB2AP61019 212 aa13.98□□□□□ -0.17
PKD1-240ENST00000570253 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
PKD1-240ENST00000570253 GAGE12JA6NER3 117 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 PGPEP1LA6NFU8 196 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 ARL14EPLP0DKL9 152 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 GAGE1Q13065 139 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 GAGE4Q13068 117 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 GAGE5Q13069 117 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 GAGE13Q4V321 117 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 ZFP2Q6ZN57 461 aa13.97□□□□□ -0.17
PKD1-240ENST00000570253 KRTAP29-1A8MX34 341 aaPredicted RBP13.96□□□□□ -0.17
PKD1-240ENST00000570253 LECT2O14960 151 aa13.96□□□□□ -0.17
PKD1-240ENST00000570253 FGF8P55075 233 aaPredicted RBP13.96□□□□□ -0.17
PKD1-240ENST00000570253 FLI1Q01543 452 aaPredicted RBP13.96□□□□□ -0.17
PKD1-240ENST00000570253 LGALSLQ3ZCW2 172 aaPredicted RBP13.96□□□□□ -0.17
PKD1-240ENST00000570253 SAPCD1Q5SSQ6 148 aa13.96□□□□□ -0.17
PKD1-240ENST00000570253 Q6ZSA8 131 aa13.96□□□□□ -0.17
PKD1-240ENST00000570253 RBFOX3A6NFN3 312 aa13.95□□□□□ -0.18
PKD1-240ENST00000570253 UPK1BO75841 260 aa13.95□□□□□ -0.18
PKD1-240ENST00000570253 ZNF80P51504 273 aaPredicted RBP13.95□□□□□ -0.18
PKD1-240ENST00000570253 PRNTQ86SH4 94 aa13.95□□□□□ -0.18
PKD1-240ENST00000570253 SYT8Q8NBV8 401 aa13.95□□□□□ -0.18
PKD1-240ENST00000570253 C11orf21Q9P2W6 132 aa13.95□□□□□ -0.18
PKD1-240ENST00000570253 PIK3CD-AS1Q5SR53 167 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 KCNIP4Q6PIL6 250 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 CYB561D1Q8N8Q1 229 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 Q8N976 141 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 TMEM75Q8N9X5 138 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 PARLQ9H300 379 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 DNAH8Q96JB1 4490 aa13.94□□□□□ -0.18
PKD1-240ENST00000570253 STAG3L2P0CL84 134 aa13.93□□□□□ -0.18
PKD1-240ENST00000570253 STAG3L3P0CL85 134 aa13.93□□□□□ -0.18
PKD1-240ENST00000570253 RNASE3P12724 160 aaKnown RBP13.93□□□□□ -0.18
PKD1-240ENST00000570253 ASIPP42127 132 aa13.93□□□□□ -0.18
PKD1-240ENST00000570253 WFDC2Q14508 124 aa13.93□□□□□ -0.18
PKD1-240ENST00000570253 DAZ4Q86SG3 579 aaKnown RBP13.93□□□□□ -0.18
PKD1-240ENST00000570253 DAZ3Q9NR90 486 aaKnown RBP13.93□□□□□ -0.18
PKD1-240ENST00000570253 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
PKD1-240ENST00000570253 MBP02144 154 aa13.92□□□□□ -0.18
PKD1-240ENST00000570253 SUMO1P63165 101 aaKnown RBP13.92□□□□□ -0.18
PKD1-240ENST00000570253 SERTAD4-AS1Q5TG53 156 aa13.92□□□□□ -0.18
PKD1-240ENST00000570253 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
PKD1-240ENST00000570253 WFDC1Q9HC57 220 aa13.92□□□□□ -0.18
PKD1-240ENST00000570253 GCHFRP30047 84 aa13.91□□□□□ -0.18
PKD1-240ENST00000570253 ELOBQ15370 118 aa13.91□□□□□ -0.18
PKD1-240ENST00000570253 OR2T35Q8NGX2 323 aa13.91□□□□□ -0.18
PKD1-240ENST00000570253 MARVELD1Q9BSK0 173 aa13.91□□□□□ -0.18
PKD1-240ENST00000570253 EPDR1Q9UM22 224 aa13.91□□□□□ -0.18
PKD1-240ENST00000570253 IGKV2D-24A0A075B6R9 120 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 RHODO00212 210 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 CXorf1O96002 111 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 DEFA1P59665 94 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 DEFA3P59666 94 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 Q8N3U1 123 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 OR2G3Q8NGZ4 309 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 RAB24Q969Q5 203 aa13.9□□□□□ -0.18
PKD1-240ENST00000570253 FABP5P3A8MUU1 101 aa13.89□□□□□ -0.19
PKD1-240ENST00000570253 SCXQ7RTU7 201 aa13.89□□□□□ -0.19
PKD1-240ENST00000570253 HSD17B11Q8NBQ5 300 aa13.89□□□□□ -0.19
PKD1-240ENST00000570253 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
PKD1-240ENST00000570253 A0A087WX48 190 aa13.88□□□□□ -0.19
PKD1-240ENST00000570253 LINC00694P0DN24 101 aa13.88□□□□□ -0.19
PKD1-240ENST00000570253 SUN5Q8TC36 379 aa13.88□□□□□ -0.19
PKD1-240ENST00000570253 IGLV2-11P01706 119 aa13.87□□□□□ -0.19
PKD1-240ENST00000570253 SERF2P84101 59 aa13.87□□□□□ -0.19
PKD1-240ENST00000570253 CHCHD7Q9BUK0 85 aa13.87□□□□□ -0.19
PKD1-240ENST00000570253 ACTR3CQ9C0K3 210 aaPredicted RBP13.87□□□□□ -0.19
PKD1-240ENST00000570253 IL36BQ9NZH7 164 aa13.87□□□□□ -0.19
PKD1-240ENST00000570253 B4DEV8 164 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 IFNA7P01567 189 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 C14orf177Q52M58 125 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 FAM74A4Q5TZK3 123 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 LINC00479Q96M42 142 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 CHAC1Q9BUX1 264 aa13.86□□□□□ -0.19
PKD1-240ENST00000570253 IGKV3D-20A0A0C4DH25 116 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 NIT1Q86X76 327 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 OR11H4Q8NGC9 324 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 UBE2WQ96B02 151 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 SAMD10Q9BYL1 202 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
PKD1-240ENST00000570253 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 RNF222A6NCQ9 220 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 H3BVH4 76 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 Q0VG73 95 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 DMRTA1Q5VZB9 504 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 C14orf178Q8N769 122 aaPredicted RBP13.84□□□□□ -0.19
PKD1-240ENST00000570253 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
PKD1-240ENST00000570253 OXTP01178 125 aa13.83□□□□□ -0.2
PKD1-240ENST00000570253 ATP6V0CP27449 155 aa13.83□□□□□ -0.2
PKD1-240ENST00000570253 TNFSF18Q9UNG2 199 aa13.83□□□□□ -0.2
PKD1-240ENST00000570253 RPL36AP83881 106 aaKnown RBP13.82□□□□□ -0.2
PKD1-240ENST00000570253 RPL36ALQ969Q0 106 aaKnown RBP13.82□□□□□ -0.2
PKD1-240ENST00000570253 JPT2Q9H910 190 aa13.82□□□□□ -0.2
PKD1-240ENST00000570253 PHLDA3Q9Y5J5 127 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 311.3 ms