RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LINC00862A6NCI5 91 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 A8MTW9 85 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 DIRC3C9JPN6 131 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 M0QXV9 152 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 SIVA1O15304 175 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 RS1O15537 224 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 CRXO43186 299 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 EIF3GO75821 320 aaKnown RBP eCLIP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 NDUFB4O95168 129 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 PRM2P04554 102 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 CT45A10P0DMU9 189 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 GCHFRP30047 84 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 CRYBA4P53673 196 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 CCL18P55774 89 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 MUC21Q5SSG8 566 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 RPL7L1Q6DKI1 246 aaKnown RBP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 C9orf47Q6ZRZ4 202 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 MTURNQ8N3F0 131 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 EIF4E3Q8N5X7 224 aaKnown RBP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 C15orf53Q8NAA6 179 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 FAM167A-AS1Q96KT0 104 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 ZNF471Q9BX82 626 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-219ENST00000569882 SH3BGRL3Q9H299 93 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 WFDC1Q9HC57 220 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 TNFSF18Q9UNG2 199 aa3.44□□□□□ -1.86
CNOT1-219ENST00000569882 TRGV11A0A075B6L2 103 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 IGHV1OR15-1A0A075B7D0 117 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 A0A087WWL8 130 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 A0A0D9SG52 128 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 CTXND1A0A1B0GTU2 59 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 F6UZH7 168 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 M0R036 132 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 NMBP08949 121 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 AZU1P20160 251 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 UBE2G1P62253 170 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 CD300CQ08708 224 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 SOHLH1Q5JUK2 328 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 EIF5AL1Q6IS14 154 aaKnown RBP3.43□□□□□ -1.86
CNOT1-219ENST00000569882 PRNTQ86SH4 94 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 C5orf17Q8NAS9 161 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 PCNPQ8WW12 178 aaKnown RBP3.43□□□□□ -1.86
CNOT1-219ENST00000569882 VGLL1Q99990 258 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 MAP1LC3CQ9BXW4 147 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 AGPAT4-IT1Q9H0P7 198 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 ZNF492Q9P255 531 aa3.43□□□□□ -1.86
CNOT1-219ENST00000569882 CSDC2Q9Y534 153 aaKnown RBP3.43□□□□□ -1.86
CNOT1-219ENST00000569882 TENM2Q9NT68 2774 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TRAV21A0A0B4J279 112 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TRGV4A0A0C4DH28 118 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 A0A0J9YY99 117 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 A0A1B0GV50 99 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 RNF222A6NCQ9 220 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 M0R2N4 97 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TSPAN13O95857 204 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 IGHV3-53P01767 116 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TPT1P13693 172 aaKnown RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 CRISP2P16562 243 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 S100A4P26447 101 aaKnown RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 GNG5P63218 68 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 RPL19P84098 196 aaKnown RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TMEM183BQ1AE95 376 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 Q5BKY6 102 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 C6orf226Q5I0X4 101 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 MRPL52Q86TS9 123 aaKnown RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TMEM183AQ8IXX5 376 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 CYB561D1Q8N8Q1 229 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 FAM213BQ8TBF2 198 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 PTH2Q96A98 100 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 ST6GAL2Q96JF0 529 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 KCNS1Q96KK3 526 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 NKX6-2Q9C056 277 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 SDF2L1Q9HCN8 221 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 MRPL16Q9NX20 251 aaKnown RBP3.42□□□□□ -1.86
CNOT1-219ENST00000569882 APLNQ9ULZ1 77 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 LENEPQ9Y5L5 61 aa3.42□□□□□ -1.86
CNOT1-219ENST00000569882 TRAV8-1A0A0A6YYK1 113 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 KLLNB2CW77 178 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 UMAD1C9J7I0 102 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 TSTD3H0UI37 97 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 BCL2L11O43521 198 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 TCRAP04437 139 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 ZNF25P17030 456 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-219ENST00000569882 AKR1C3P42330 323 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 TCL1AP56279 114 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 ZNF345Q14585 488 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 IBA57Q5T440 356 aaKnown RBP3.41□□□□□ -1.86
CNOT1-219ENST00000569882 Q6ZTI0 123 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 TMED6Q8WW62 240 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 SFRP2Q96HF1 295 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
CNOT1-219ENST00000569882 A0A1W2PRE2 83 aa3.4□□□□□ -1.87
CNOT1-219ENST00000569882 HMSDA8MTL9 139 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 265.5 ms