RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 B4DEV8 164 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 M0R2P5 195 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 SULT1A2P50226 295 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 RPL19P84098 196 aaKnown RBP6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 ESRGQ1W209 222 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 LGALS9BQ3B8N2 356 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 TDRG1Q3Y452 100 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 ZNF876PQ49A33 203 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 DERL1Q9BUN8 251 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 MUC4Q99102 2169 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 MUC21A0A0G2JKD1 596 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 TEX46H3BTG2 121 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 MGST1P10620 155 aaKnown RBP6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 RNASE3P12724 160 aaKnown RBP6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 GYPEP15421 78 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 ASIPP42127 132 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 CRYBA4P53673 196 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 PCNPQ8WW12 178 aaKnown RBP6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 JPT2Q9H910 190 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 DNAH10Q8IVF4 4471 aa6.26□□□□□ -1.41
GTF3C1-210ENST00000569394 KRBOX1C9JBD0 128 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 LTAP01374 205 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 ARMS2P0C7Q2 107 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 RPL35P42766 123 aaKnown RBP6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 RAB5CP51148 216 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 CEBPGP53567 150 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 RNF212Q495C1 297 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 ZNF506Q5JVG8 444 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 RASL10AQ92737 203 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 MANBALQ9NQG1 85 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 PRO0255Q9UI72 69 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 ZFP30Q9Y2G7 519 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 ICOSQ9Y6W8 199 aa6.25□□□□□ -1.41
GTF3C1-210ENST00000569394 TRAV4A0A0B4J268 109 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 M0R381 172 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 FAM74A4Q5TZK3 123 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 Q9H8V8 135 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 DNAH6Q9C0G6 4158 aa6.24□□□□□ -1.41
GTF3C1-210ENST00000569394 A0A087WWL8 130 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 K7EQD1 137 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 IFNA1P01562 189 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 GZMBP10144 247 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 SRIP30626 198 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 Q6ZSN1 163 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 ZNRF2Q8NHG8 242 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 C18orf15Q96N68 181 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 TPPP3Q9BW30 176 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 SAMD10Q9BYL1 202 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 PHLDA3Q9Y5J5 127 aa6.23□□□□□ -1.41
GTF3C1-210ENST00000569394 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 TRAV1-1A0A0B4J248 108 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 NBDYA0A0U1RRE5 68 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 RTL8CO15255 209 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 RS1O15537 224 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 NXPH4O95158 308 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 S100A9P06702 114 aaKnown RBP6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 BCL2P10415 239 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 GNG4P50150 75 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 MEF2BQ02080 365 aaPredicted RBP6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 C1orf134Q5TEV5 83 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 LYPD5Q6UWN5 251 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 TCEAL7Q9BRU2 100 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
GTF3C1-210ENST00000569394 TRBV6-1A0A0K0K1D8 114 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 GAGE1Q13065 139 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 GAGE4Q13068 117 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 GAGE5Q13069 117 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 SLAQ13239 276 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 GAGE13Q4V321 117 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 Q6ZR54 194 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 SYT8Q8NBV8 401 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 PARLQ9H300 379 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 Q9UF83 564 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 VAX2Q9UIW0 290 aa6.21□□□□□ -1.42
GTF3C1-210ENST00000569394 RBFOX3A6NFN3 312 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 H3BNG1 76 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 SIVA1O15304 175 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 GATA1P15976 413 aaPredicted RBP6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 BLOC1S1P78537 153 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 CT83Q5H943 113 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 TOR2AQ5JU69 321 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 WFDC10BQ8IUB3 73 aa6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
GTF3C1-210ENST00000569394 OR10AG1Q8NH19 301 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms