RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TRAV8-6A0A0B4J262 113 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 TRBV7-9A0A0J9YWB2 115 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 G3V3Q6 166 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 M0R2P5 195 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 SYT8Q8NBV8 401 aa9.76□□□□□ -0.85
USB1-214ENST00000568848 GCHFRP30047 84 aa9.75□□□□□ -0.85
USB1-214ENST00000568848 FAM74A1Q5RGS3 127 aa9.75□□□□□ -0.85
USB1-214ENST00000568848 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
USB1-214ENST00000568848 ASB13Q8WXK3 278 aa9.75□□□□□ -0.85
USB1-214ENST00000568848 SMLR1H3BR10 107 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 C1QBP02746 253 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 TIRAPP58753 221 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 SERF2P84101 59 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 LELP1Q5T871 98 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 C11orf21Q9P2W6 132 aa9.74□□□□□ -0.85
USB1-214ENST00000568848 BORCS7-ASMTA0A0B4J1R7 106 aa9.73□□□□□ -0.85
USB1-214ENST00000568848 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
USB1-214ENST00000568848 MBP02144 154 aa9.73□□□□□ -0.85
USB1-214ENST00000568848 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
USB1-214ENST00000568848 TMED6Q8WW62 240 aa9.73□□□□□ -0.85
USB1-214ENST00000568848 ACTR3CQ9C0K3 210 aaPredicted RBP9.73□□□□□ -0.85
USB1-214ENST00000568848 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
USB1-214ENST00000568848 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 ARPC5O15511 151 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
USB1-214ENST00000568848 SUMO1P63165 101 aaKnown RBP9.72□□□□□ -0.85
USB1-214ENST00000568848 GAGE1Q13065 139 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 GAGE4Q13068 117 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 GAGE5Q13069 117 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 TDRG1Q3Y452 100 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 SUN5Q8TC36 379 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 TREM1Q9NP99 234 aa9.72□□□□□ -0.85
USB1-214ENST00000568848 LRP2P98164 4655 aa9.71□□□□□ -0.85
USB1-214ENST00000568848 RS1O15537 224 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 CXorf1O96002 111 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 ZNF876PQ49A33 203 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 ARL6IP6Q8N6S5 226 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 CYTL1Q9NRR1 136 aa9.71□□□□□ -0.86
USB1-214ENST00000568848 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 TCRAP04437 139 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
USB1-214ENST00000568848 RHOHQ15669 191 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 GTSF1LQ9H1H1 148 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
USB1-214ENST00000568848 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
USB1-214ENST00000568848 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 DAZAP1Q96EP5 407 aaKnown RBP9.69□□□□□ -0.86
USB1-214ENST00000568848 JPT2Q9H910 190 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 PSG8Q9UQ74 426 aa9.69□□□□□ -0.86
USB1-214ENST00000568848 RNF213Q63HN8 5207 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 TRAV21A0A0B4J279 112 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 IGLV2-11P01706 119 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 UBE2G2P60604 165 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 PRNTQ86SH4 94 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 OR11H4Q8NGC9 324 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 TNXBP22105 4242 aa9.68□□□□□ -0.86
USB1-214ENST00000568848 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 TRAV34A0A0B4J273 112 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 TAAR5O14804 337 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 OXTP01178 125 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 FLI1Q01543 452 aaPredicted RBP9.67□□□□□ -0.86
USB1-214ENST00000568848 LAGE3Q14657 143 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 C14orf178Q8N769 122 aaPredicted RBP9.67□□□□□ -0.86
USB1-214ENST00000568848 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
USB1-214ENST00000568848 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 A0A1W2PRE2 83 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 K7EQM0 130 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 ODF1Q14990 250 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 NDFIP1Q9BT67 221 aa9.66□□□□□ -0.86
USB1-214ENST00000568848 GCGP01275 180 aa9.65□□□□□ -0.86
USB1-214ENST00000568848 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
USB1-214ENST00000568848 KCNRGQ8N5I3 272 aa9.65□□□□□ -0.86
USB1-214ENST00000568848 KLK12Q9UKR0 248 aa9.65□□□□□ -0.86
USB1-214ENST00000568848 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
USB1-214ENST00000568848 MAP1LC3B2A6NCE7 125 aa9.64□□□□□ -0.87
USB1-214ENST00000568848 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms