RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 RPRMQ9NS64 109 aa3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 RHBDL2Q9NX52 303 aa3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 SCN3BQ9NY72 215 aa3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 TIMM8BQ9Y5J9 83 aaPredicted RBP3.88□□□□□ -1.79
HERPUD1-214ENST00000568651 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 LRP2P98164 4655 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 HLA-DMAP28067 261 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 TSPOP30536 169 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 RPL5P46777 297 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 YPEL3P61236 119 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 HIST1H1AQ02539 215 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 ZNF90Q03938 601 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 RNASE13Q5GAN3 156 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 SPATA31B1PQ5VZV4 182 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 SFXN4Q6P4A7 337 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 OR8I2Q8N0Y5 310 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 RNF182Q8N6D2 247 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 OR5H2Q8NGV7 314 aa3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 RNASE11Q8TAA1 199 aaKnown RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 SDHCQ99643 169 aaPredicted RBP3.87□□□□□ -1.79
HERPUD1-214ENST00000568651 NDUFC2-KCTD14E9PQ53 114 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 ISLRO14498 428 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 PSCAO43653 123 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 PTTG1O95997 202 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 IGHV3-53P01767 116 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 RLN2P04090 185 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 S100GP29377 79 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 B2MP61769 119 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 SUPT4H1P63272 117 aaKnown RBP3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 IDNKQ5T6J7 187 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 LGI3Q8N145 548 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 ZNF738Q8NE65 137 aa3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 PARD6GQ9BYG4 376 aaPredicted RBP3.86□□□□□ -1.79
HERPUD1-214ENST00000568651 TRAV8-2A0A0B4J237 113 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 LINC00854A0A1B0GVQ3 168 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 TRDV1A0A1B0GX56 115 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 CEBPZOSA8MTT3 80 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 A8MTW9 85 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 ADAP1O75689 374 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 SLC25A4P12235 298 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 PRSS3P35030 304 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 HTR2BP41595 481 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 GALR1P47211 349 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 TSPAN5P62079 268 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 SP6Q3SY56 376 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 Q6ZTI0 123 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 Q6ZVH6 145 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 C10orf67Q8IYJ2 551 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 TMEM263Q8WUH6 116 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 CHCHD7Q9BUK0 85 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 TPRKBQ9Y3C4 175 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 LY96Q9Y6Y9 160 aa3.85□□□□□ -1.79
HERPUD1-214ENST00000568651 TRGV2A0A075B6R0 118 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 FAM240AA0A1B0GVK7 77 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 LRCOL1A6NCL2 159 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 ZNF98A6NK75 572 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 K7EN84 100 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 IGLV2-8P01709 118 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 CRYGDP07320 174 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 PSMB9P28065 219 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 BSXQ3C1V8 233 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 LYPD5Q6UWN5 251 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 SCXQ7RTU7 201 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 TMEM256Q8N2U0 113 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 PACRGLQ8N7B6 248 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 Q8N814 137 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 RNASEH2CQ8TDP1 164 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 TP53RKQ96S44 253 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 C20orf144Q9BQM9 153 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 LINC00467Q9BRT7 94 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 DIABLOQ9NR28 239 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 ICOSQ9Y6W8 199 aa3.84□□□□□ -1.79
HERPUD1-214ENST00000568651 IGKV1D-37A0A075B6S9 117 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 TRGV1A0A0A0MS02 117 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 TRAV8-6A0A0B4J262 113 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 H3BNG1 76 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 H7BYZ3 331 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 LECT2O14960 151 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 EVI2AP22794 236 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 SDC2P34741 201 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 PIGPP57054 158 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 SPCS3P61009 180 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 WFDC2Q14508 124 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 C5orf47Q569G3 176 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 C1orf194Q5T5A4 169 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 OR8A1Q8NGG7 326 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 DUSP21Q9H596 190 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 TREM1Q9NP99 234 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 TXNL4BQ9NX01 149 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 NDUFB11Q9NX14 153 aa3.83□□□□□ -1.8
HERPUD1-214ENST00000568651 C3orf85A0A1B0GTC6 90 aa3.82□□□□□ -1.8
HERPUD1-214ENST00000568651 SNRPGP15A8MWD9 76 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms