RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARL14EPLP0DKL9 152 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
NME3-211ENST00000568561 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 OR11H4Q8NGC9 324 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 NDFIP1Q9BT67 221 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 GTSF1LQ9H1H1 148 aa10.29□□□□□ -0.76
NME3-211ENST00000568561 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
NME3-211ENST00000568561 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
NME3-211ENST00000568561 HMSDA8MTL9 139 aa10.28□□□□□ -0.76
NME3-211ENST00000568561 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
NME3-211ENST00000568561 OR10G9Q8NGN4 311 aa10.28□□□□□ -0.76
NME3-211ENST00000568561 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
NME3-211ENST00000568561 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
NME3-211ENST00000568561 GAGE12JA6NER3 117 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 TCRAP04437 139 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 GAGE1Q13065 139 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 GAGE4Q13068 117 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 GAGE5Q13069 117 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 LAGE3Q14657 143 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 GAGE13Q4V321 117 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
NME3-211ENST00000568561 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
NME3-211ENST00000568561 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
NME3-211ENST00000568561 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
NME3-211ENST00000568561 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
NME3-211ENST00000568561 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
NME3-211ENST00000568561 Q6ZSA8 131 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 C5orf17Q8NAS9 161 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 Q9UF83 564 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 TNFSF18Q9UNG2 199 aa10.26□□□□□ -0.77
NME3-211ENST00000568561 TAAR5O14804 337 aa10.25□□□□□ -0.77
NME3-211ENST00000568561 IGLV2-11P01706 119 aa10.25□□□□□ -0.77
NME3-211ENST00000568561 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
NME3-211ENST00000568561 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
NME3-211ENST00000568561 AQP10Q96PS8 301 aa10.25□□□□□ -0.77
NME3-211ENST00000568561 PARLQ9H300 379 aa10.25□□□□□ -0.77
NME3-211ENST00000568561 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 CIDEAO60543 219 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 LINC00694P0DN24 101 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 GCHFRP30047 84 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
NME3-211ENST00000568561 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 BAALCQ8WXS3 180 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 JPT2Q9H910 190 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
NME3-211ENST00000568561 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 ARPC5O15511 151 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 ZNF345Q14585 488 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
NME3-211ENST00000568561 INO80EQ8NBZ0 244 aaPredicted RBP10.23□□□□□ -0.77
NME3-211ENST00000568561 RAB24Q969Q5 203 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
NME3-211ENST00000568561 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 K7EQM0 130 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
NME3-211ENST00000568561 LGALSLQ3ZCW2 172 aaPredicted RBP10.22□□□□□ -0.77
NME3-211ENST00000568561 C9orf62Q8N4C0 152 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 PTH2Q96A98 100 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 LINC00479Q96M42 142 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 EPDR1Q9UM22 224 aa10.22□□□□□ -0.77
NME3-211ENST00000568561 TRAV34A0A0B4J273 112 aa10.21□□□□□ -0.77
NME3-211ENST00000568561 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
NME3-211ENST00000568561 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.77
NME3-211ENST00000568561 KCNRGQ8N5I3 272 aa10.21□□□□□ -0.77
NME3-211ENST00000568561 CYB561D1Q8N8Q1 229 aa10.21□□□□□ -0.77
NME3-211ENST00000568561 A0A0D9SG52 128 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 H3BVH4 76 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 S100A4P26447 101 aaKnown RBP10.2□□□□□ -0.78
NME3-211ENST00000568561 NKX2-5P52952 324 aaPredicted RBP10.2□□□□□ -0.78
NME3-211ENST00000568561 ZFP2Q6ZN57 461 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 OR2G3Q8NGZ4 309 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 SUN5Q8TC36 379 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 SH3BGRL3Q9H299 93 aa10.2□□□□□ -0.78
NME3-211ENST00000568561 A8MWV9 139 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 ASIPP42127 132 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 TOR2AQ5JU69 321 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
NME3-211ENST00000568561 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
NME3-211ENST00000568561 RBFOX3A6NFN3 312 aa10.18□□□□□ -0.78
NME3-211ENST00000568561 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
NME3-211ENST00000568561 M0R036 132 aa10.17□□□□□ -0.78
NME3-211ENST00000568561 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
NME3-211ENST00000568561 SAPCD1Q5SSQ6 148 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms