RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 UNQ9165/PRO28630Q6UXU0 137 aa16.29■□□□□ 0.2
DENND4A-208ENST00000568515 SCGB1D4Q6XE38 83 aa16.29■□□□□ 0.2
DENND4A-208ENST00000568515 TMEM219Q86XT9 240 aa16.29■□□□□ 0.2
DENND4A-208ENST00000568515 SOCS3O14543 225 aa16.29■□□□□ 0.2
DENND4A-208ENST00000568515 COX6B1P14854 86 aa16.29■□□□□ 0.2
DENND4A-208ENST00000568515 RNASE4P34096 147 aaKnown RBP16.29■□□□□ 0.2
DENND4A-208ENST00000568515 ASH1LQ9NR48 2969 aaKnown RBP16.28■□□□□ 0.2
DENND4A-208ENST00000568515 NDUFS8O00217 210 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 GNRH2O43555 120 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 PPP1R17O96001 155 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 FOXC1Q12948 553 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 NBASA2RRP1 2371 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 SRSF9Q13242 221 aaKnown RBP eCLIP16.28■□□□□ 0.2
DENND4A-208ENST00000568515 C19orf54Q5BKX5 351 aa16.28■□□□□ 0.2
DENND4A-208ENST00000568515 LINC01549A6NIU2 74 aa16.27■□□□□ 0.2
DENND4A-208ENST00000568515 UBE2D1P51668 147 aa16.27■□□□□ 0.2
DENND4A-208ENST00000568515 A0A1W2PPR1 153 aa16.27■□□□□ 0.19
DENND4A-208ENST00000568515 RNASE3P12724 160 aaKnown RBP16.27■□□□□ 0.19
DENND4A-208ENST00000568515 FAM19A4Q96LR4 140 aa16.27■□□□□ 0.19
DENND4A-208ENST00000568515 DUSP14O95147 198 aaKnown RBP16.26■□□□□ 0.19
DENND4A-208ENST00000568515 APOMO95445 188 aa16.26■□□□□ 0.19
DENND4A-208ENST00000568515 TRBV12-3P01733 135 aa16.26■□□□□ 0.19
DENND4A-208ENST00000568515 CRYGDP07320 174 aa16.26■□□□□ 0.19
DENND4A-208ENST00000568515 KLHL30-AS1Q8NEE0 82 aa16.26■□□□□ 0.19
DENND4A-208ENST00000568515 DLX4Q92988 240 aaPredicted RBP16.26■□□□□ 0.19
DENND4A-208ENST00000568515 CFAP126Q5VTH2 177 aa16.25■□□□□ 0.19
DENND4A-208ENST00000568515 SPTBN1Q01082 2364 aaKnown RBP16.25■□□□□ 0.19
DENND4A-208ENST00000568515 F6UB75 175 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 NDUFA4O00483 81 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 LMO4P61968 165 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 POM121L12Q8N7R1 296 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 MOB4Q9Y3A3 225 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 SMCPP49901 116 aaPredicted RBP16.24■□□□□ 0.19
DENND4A-208ENST00000568515 APRG1Q8IVJ8 170 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 CEP295Q9C0D2 2601 aa16.24■□□□□ 0.19
DENND4A-208ENST00000568515 PTPRZ1P23471 2315 aaPredicted RBP16.23■□□□□ 0.19
DENND4A-208ENST00000568515 C11orf86A6NJI1 115 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 TSPAN13O95857 204 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 TSHBP01222 138 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 IGLV4-69A0A075B6H9 119 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 RPL11P62913 178 aaKnown RBP16.23■□□□□ 0.19
DENND4A-208ENST00000568515 FOXI1Q12951 378 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 C1QTNF4Q9BXJ3 329 aa16.23■□□□□ 0.19
DENND4A-208ENST00000568515 IGHV1-69DA0A0B4J2H0 117 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 KIF25-AS1Q9Y6Z4 181 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 LOC107984156A0A0G2JMH3 177 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 CD7P09564 240 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 CRIP2P52943 208 aaPredicted RBP16.22■□□□□ 0.19
DENND4A-208ENST00000568515 LINC00315P59091 139 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 ARL17AQ8IVW1 177 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 ATP6V0E2Q8NHE4 81 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 TP53TG1Q9Y2A0 90 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 MUC4Q99102 2169 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 PSMB2P49721 201 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 PAPPA-AS1Q5QFB9 102 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 SFTA2Q6UW10 78 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 ZFP2Q6ZN57 461 aa16.22■□□□□ 0.19
DENND4A-208ENST00000568515 IGIPA6NJ69 53 aa16.21■□□□□ 0.19
DENND4A-208ENST00000568515 NXPH4O95158 308 aa16.21■□□□□ 0.19
DENND4A-208ENST00000568515 HERVK_113P61574 105 aa16.21■□□□□ 0.19
DENND4A-208ENST00000568515 BPESC1Q9GZL8 116 aa16.21■□□□□ 0.19
DENND4A-208ENST00000568515 IGHV4OR15-8A0A075B7B6 117 aa16.21■□□□□ 0.18
DENND4A-208ENST00000568515 A0A087WW49 117 aa16.21■□□□□ 0.18
DENND4A-208ENST00000568515 EMP1P54849 157 aa16.21■□□□□ 0.18
DENND4A-208ENST00000568515 RPL32P62910 135 aaKnown RBP16.21■□□□□ 0.18
DENND4A-208ENST00000568515 A0A0J9YY99 117 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 A0A1B0GV72 72 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 UBE2D3P61077 147 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 UBE2D2P62837 147 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 TRBV7-9A0A0J9YWB2 115 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 PMVKQ15126 192 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 CLEC2AQ6UVW9 174 aa16.2■□□□□ 0.18
DENND4A-208ENST00000568515 IGKV3-7A0A075B6H7 116 aa16.19■□□□□ 0.18
DENND4A-208ENST00000568515 IGHV3OR16-10A0A075B7F0 116 aa16.19■□□□□ 0.18
DENND4A-208ENST00000568515 NBL1P41271 181 aa16.19■□□□□ 0.18
DENND4A-208ENST00000568515 POLR2KP53803 58 aaKnown RBP16.19■□□□□ 0.18
DENND4A-208ENST00000568515 DEFB104AQ8WTQ1 72 aa16.19■□□□□ 0.18
DENND4A-208ENST00000568515 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
DENND4A-208ENST00000568515 NDUFA11Q86Y39 141 aa16.18■□□□□ 0.18
DENND4A-208ENST00000568515 NFE4Q86UQ8 179 aa16.18■□□□□ 0.18
DENND4A-208ENST00000568515 JPT2Q9H910 190 aa16.17■□□□□ 0.18
DENND4A-208ENST00000568515 IGHV3-11P01762 117 aa16.17■□□□□ 0.18
DENND4A-208ENST00000568515 RPL39P62891 51 aaKnown RBP16.17■□□□□ 0.18
DENND4A-208ENST00000568515 SUMO4Q6EEV6 95 aa16.17■□□□□ 0.18
DENND4A-208ENST00000568515 SYT8Q8NBV8 401 aa16.17■□□□□ 0.18
DENND4A-208ENST00000568515 TMEM141Q96I45 108 aa16.17■□□□□ 0.18
DENND4A-208ENST00000568515 VCYO14598 125 aa16.16■□□□□ 0.18
DENND4A-208ENST00000568515 KLRB1Q12918 225 aa16.16■□□□□ 0.18
DENND4A-208ENST00000568515 ZNF418Q8TF45 676 aaPredicted RBP16.16■□□□□ 0.18
DENND4A-208ENST00000568515 LYRM7Q5U5X0 104 aa16.16■□□□□ 0.18
DENND4A-208ENST00000568515 KIR2DL4Q99706 377 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 TSPEAR-AS2P59090 65 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 Q6ZS46 218 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 USMG5Q96IX5 58 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 TIMM17AQ99595 171 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 RHPN1-AS1Q9BWJ2 59 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 CDIP1Q9H305 208 aa16.15■□□□□ 0.18
DENND4A-208ENST00000568515 FAM159AQ6UWV7 190 aa16.14■□□□□ 0.17
DENND4A-208ENST00000568515 KLLNB2CW77 178 aa16.14■□□□□ 0.17
DENND4A-208ENST00000568515 IGHV3-30P01768 117 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms