RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 UQCC3Q6UW78 93 aa14.36□□□□□ -0.11
RNF40-210ENST00000566811 FAM231DQ6ZW35 169 aa14.36□□□□□ -0.11
RNF40-210ENST00000566811 SYT8Q8NBV8 401 aa14.36□□□□□ -0.11
RNF40-210ENST00000566811 OCC1Q8TAD7 63 aa14.36□□□□□ -0.11
RNF40-210ENST00000566811 H3BVH4 76 aa14.35□□□□□ -0.11
RNF40-210ENST00000566811 K7EN84 100 aa14.35□□□□□ -0.11
RNF40-210ENST00000566811 ZNF876PQ49A33 203 aa14.35□□□□□ -0.11
RNF40-210ENST00000566811 LINC01551Q86U37 167 aa14.35□□□□□ -0.11
RNF40-210ENST00000566811 NAT8Q9UHE5 227 aa14.35□□□□□ -0.11
RNF40-210ENST00000566811 DNAH1Q9P2D7 4330 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 TRAV4A0A0B4J268 109 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 SRSF3P84103 164 aaKnown RBP14.34□□□□□ -0.11
RNF40-210ENST00000566811 SLAQ13239 276 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 TMEM241Q24JQ0 296 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 SCRT2Q9NQ03 307 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
RNF40-210ENST00000566811 TMSB15BA0A087X1C1 80 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 C9JQL5 133 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 OR5AL1P0C617 328 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 CT83Q5H943 113 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 OR2D3Q8NGH3 330 aa14.33□□□□□ -0.12
RNF40-210ENST00000566811 A0A1W2PPQ1 181 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 GRIFINA4D1Z8 144 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 A8MWV9 139 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 F5H768 121 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 SNAI2O43623 268 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 HTN3P15516 51 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 RPL19P84098 196 aaKnown RBP14.32□□□□□ -0.12
RNF40-210ENST00000566811 ZFP82Q8N141 532 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 C15orf53Q8NAA6 179 aa14.32□□□□□ -0.12
RNF40-210ENST00000566811 RPP21Q9H633 154 aaKnown RBP14.32□□□□□ -0.12
RNF40-210ENST00000566811 IGHV4-4A0A075B6R2 117 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 LCE6AA0A183 80 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 IGLL5B9A064 214 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 H3BNG1 76 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 ZNF575Q86XF7 245 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 NUDT11Q96G61 164 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 LYSTQ99698 3801 aa14.31□□□□□ -0.12
RNF40-210ENST00000566811 SSBP4Q9BWG4 385 aaPredicted RBP14.31□□□□□ -0.12
RNF40-210ENST00000566811 F2Z2F3 143 aa14.3□□□□□ -0.12
RNF40-210ENST00000566811 SFTA3P0C7M3 94 aa14.3□□□□□ -0.12
RNF40-210ENST00000566811 ERVFC1-1P60608 527 aa14.3□□□□□ -0.12
RNF40-210ENST00000566811 OR4C5Q8NGB2 326 aa14.3□□□□□ -0.12
RNF40-210ENST00000566811 RNASE7Q9H1E1 156 aaKnown RBP14.3□□□□□ -0.12
RNF40-210ENST00000566811 NACAE9PAV3 2078 aa14.3□□□□□ -0.12
RNF40-210ENST00000566811 NXPH4O95158 308 aa14.29□□□□□ -0.12
RNF40-210ENST00000566811 PNRC1Q12796 327 aaPredicted RBP14.29□□□□□ -0.12
RNF40-210ENST00000566811 C15orf54Q8N8G6 183 aa14.29□□□□□ -0.12
RNF40-210ENST00000566811 OSTCQ9NRP0 149 aa14.29□□□□□ -0.12
RNF40-210ENST00000566811 RHODO00212 210 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 RS1O15537 224 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 GATCO43716 136 aaKnown RBP14.28□□□□□ -0.12
RNF40-210ENST00000566811 IGLC6P0CF74 106 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 TMEM88Q6PEY1 159 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 ZFP2Q6ZN57 461 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 FER1L6-AS1Q8NA97 138 aa14.28□□□□□ -0.12
RNF40-210ENST00000566811 LINC00862A6NCI5 91 aa14.27□□□□□ -0.13
RNF40-210ENST00000566811 A8MWL6 223 aa14.27□□□□□ -0.13
RNF40-210ENST00000566811 RPL23P62829 140 aaKnown RBP14.27□□□□□ -0.13
RNF40-210ENST00000566811 ADIRFQ15847 76 aa14.27□□□□□ -0.13
RNF40-210ENST00000566811 ISOC2Q96AB3 205 aa14.27□□□□□ -0.13
RNF40-210ENST00000566811 PRO0255Q9UI72 69 aa14.27□□□□□ -0.13
RNF40-210ENST00000566811 TRGV4A0A0C4DH28 118 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 FAM231BA6NCW3 169 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 HOXA5P20719 270 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 CACNG7P62955 275 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 SPANXN1Q5VSR9 72 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 CFAP126Q5VTH2 177 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 SFRP2Q96HF1 295 aa14.26□□□□□ -0.13
RNF40-210ENST00000566811 M0R381 172 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 CTRLP40313 264 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 DMRTA1Q5VZB9 504 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 WDR73Q6P4I2 378 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 COMMD7Q86VX2 200 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 ZNF479Q96JC4 524 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 GFRA4Q9GZZ7 299 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 APLNQ9ULZ1 77 aa14.25□□□□□ -0.13
RNF40-210ENST00000566811 FHL2Q14192 279 aa14.24□□□□□ -0.13
RNF40-210ENST00000566811 POM121L12Q8N7R1 296 aa14.24□□□□□ -0.13
RNF40-210ENST00000566811 OR10AG1Q8NH19 301 aa14.24□□□□□ -0.13
RNF40-210ENST00000566811 CNFNQ9BYD5 112 aa14.24□□□□□ -0.13
RNF40-210ENST00000566811 TRAV26-1A0A087WT03 109 aa14.23□□□□□ -0.13
RNF40-210ENST00000566811 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
RNF40-210ENST00000566811 AP1S3Q96PC3 154 aa14.23□□□□□ -0.13
RNF40-210ENST00000566811 TPPP3Q9BW30 176 aa14.23□□□□□ -0.13
RNF40-210ENST00000566811 HHLA3Q9XRX5 114 aa14.23□□□□□ -0.13
RNF40-210ENST00000566811 PLECQ15149 4684 aaKnown RBP14.22□□□□□ -0.13
RNF40-210ENST00000566811 PAX4O43316 350 aa14.22□□□□□ -0.13
RNF40-210ENST00000566811 GZMBP10144 247 aa14.22□□□□□ -0.13
RNF40-210ENST00000566811 CRYBA4P53673 196 aa14.22□□□□□ -0.13
RNF40-210ENST00000566811 TSKUQ8WUA8 353 aa14.22□□□□□ -0.13
RNF40-210ENST00000566811 TRBV6-4A0A1B0GX49 114 aa14.21□□□□□ -0.13
RNF40-210ENST00000566811 GATA1P15976 413 aaPredicted RBP14.21□□□□□ -0.13
RNF40-210ENST00000566811 FOXA3P55318 350 aaPredicted RBP14.21□□□□□ -0.13
RNF40-210ENST00000566811 OR10G8Q8NGN5 311 aa14.21□□□□□ -0.13
RNF40-210ENST00000566811 TMEM218A2RU14 115 aa14.2□□□□□ -0.14
RNF40-210ENST00000566811 PPP1R2P9O14990 202 aa14.2□□□□□ -0.14
RNF40-210ENST00000566811 TRGC1P0CF51 173 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms